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KIFC2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:107.2 nTPM
FANTOM5:40.3 Scaled Tags Per Million
Pig:17.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029264
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 107.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 107.2
Samples: 246

Max nTPM: 243.3
Min nTPM: 14.5
Std nTPM: 47.0
Median nTPM: 113.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 243.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 224.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 212.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 210.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 197.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 195.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 195.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 188.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 182.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 181.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 180.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 178.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 178.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 176.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 176.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 175.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 173.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 172.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 171.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 169.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 168.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 165.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 164.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 164.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 163.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 162.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 161.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 161.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 161.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 161.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 160.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 160.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 160.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 159.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 159.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 159.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 158.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 157.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 157.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 156.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 152.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 152.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 151.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 149.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 148.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 148.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 148.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 146.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 146.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 145.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 145.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 144.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 144.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 142.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 141.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 141.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 140.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 139.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 139.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 138.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 138.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 138.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 137.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 136.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 136.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 136.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 136.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 136.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 135.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 135.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 134.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 134.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 134.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 134.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 134.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 133.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 133.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 133.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 132.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 129.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 129.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 129.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 129.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 128.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 128.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 127.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 127.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 127.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 125.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 125.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 125.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 124.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 124.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 123.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 122.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 122.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 121.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 119.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 118.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 117.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 117.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 116.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 115.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 115.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 114.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 113.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 113.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 112.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 112.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 111.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 110.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 109.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 109.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 109.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 109.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 108.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 107.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 106.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 106.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 105.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 105.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 105.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 103.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 98.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 95.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 94.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 94.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 93.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 93.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 92.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 92.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 92.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 92.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 91.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 91.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 90.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 89.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 89.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 89.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 82.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 82.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 80.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 79.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 78.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 78.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 77.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 76.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 76.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 72.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 69.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 68.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 66.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 65.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 64.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 64.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 62.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 62.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 58.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 56.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 52.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 42.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 40.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 39.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 38.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 38.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 35.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 34.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 34.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 32.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 27.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 25.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 17.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 17.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 14.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 40.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 40.3
FF:10164-103B2 76 years, female 40.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 17.4
Pig sample Sample description nTPM
Caudate
nTPM: 17.4
Samples: 4

Max nTPM: 20.8
Min nTPM: 12.9
Sample A Female 12.9
Sample B Female 20.8
Sample C Male 20.1
Sample D Male 15.9

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