HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.1 nTPM
HPA:46.1 nTPM
GTEx:70.7 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:29.8 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 43.1
1911 Female, age 85, right hemisphere 48.3
2621 Female, age 67, right hemisphere 46.8
2529 Female, age 94, left hemisphere 45.3
2148 Female, age 91, left hemisphere 41.5
1898 Male, age 80, left hemisphere 40.0
1855 Male, age 76, left hemisphere 36.9
Dentate gyrus
nTPM: 42.0
1927 Female, age 91, both hemispheres 46.7
2531 Female, age 67, both hemispheres 45.6
2530 Female, age 94, left hemisphere 42.6
2246 Female, age 85, both hemispheres 41.2
2528 Male, age 74, both hemispheres 40.8
2010 Male, age 76, both hemispheres 35.0
Entorhinal gyrus
nTPM: 44.6
2613 Female, age 94, left hemisphere 54.1
1787 Male, age 76, left hemisphere 45.8
2764 Male, age 80, right hemisphere 45.8
2686 Male, age 75, right hemisphere 42.5
1938 Female, age 85, left hemisphere 42.1
2117 Female, age 91, right hemisphere 37.2
Hippocampus, CA1
nTPM: 43.9
2749 Male, age 80, left hemisphere 55.9
2527 Male, age 74, both hemispheres 44.5
2082 Female, age 91, right hemisphere 42.7
1873 Female, age 85, both hemispheres 38.9
2045 Male, age 76, both hemispheres 37.6
Hippocampus, CA2
nTPM: 42.9
2113 Female, age 91, right hemisphere 45.1
1892 Male, age 76, both hemispheres 44.0
1963 Male, age 80, left hemisphere 43.5
2437 Female, age 94, left hemisphere 43.1
2249 Male, age 74, both hemispheres 42.4
1940 Female, age 85, left hemisphere 39.5
Hippocampus, CA3
nTPM: 45.0
2137 Male, age 80, left hemisphere 54.7
2861 Female, age 67, both hemispheres 49.6
2620 Female, age 94, left hemisphere 43.1
1891 Female, age 85, both hemispheres 42.5
1867 Male, age 76, both hemispheres 41.0
2436 Male, age 74, both hemispheres 39.3
Parahippocampal cortex
nTPM: 45.6
2245 Female, age 91, both hemispheres 52.3
2622 Female, age 67, right hemisphere 50.4
2250 Female, age 67, right hemisphere 48.7
1933 Female, age 85, both hemispheres 47.0
1990 Female, age 91, right hemisphere 45.4
2693 Female, age 94, both hemispheres 45.0
2532 Female, age 72, left hemisphere 43.2
1850 Male, age 80, both hemispheres 41.8
2692 Male, age 74, both hemispheres 41.6
2018 Male, age 76, both hemispheres 40.9
Perirhinal gyrus
nTPM: 46.1
1847 Female, age 91, left hemisphere 50.1
2521 Female, age 94, right hemisphere 46.7
1794 Male, age 80, right hemisphere 45.7
1841 Female, age 85, right hemisphere 44.5
2848 Male, age 76, right hemisphere 43.3
Subiculum
nTPM: 41.8
2619 Male, age 74, both hemispheres 43.9
1977 Female, age 85, both hemispheres 43.2
2729 Female, age 91, right hemisphere 41.6
1901 Male, age 80, both hemispheres 41.4
2438 Female, age 94, left hemisphere 41.4
2042 Male, age 76, both hemispheres 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.7
Samples: 197

Max nTPM: 206.5
Min nTPM: 11.6
Std nTPM: 34.9
Median nTPM: 64.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 206.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 195.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 162.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 160.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 152.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 147.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 144.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 142.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 142.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 140.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 140.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10153-102I9 76 years, female 44.2
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 21.4
Sample A Female 38.0
Sample B Female 26.4
Sample C Male 33.6
Sample D Male 21.4
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.4
Min nTPM: 21.4
Sample A Female 26.5
Sample B Female 29.4
Sample C Male 29.1
Sample D Male 21.4
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 37.6
Min nTPM: 23.6
Sample A Female 37.6
Sample B Female 27.1
Sample C Male 23.6
Sample D Male 24.0
Ventral hippocampus
nTPM: 28.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 23.8
Sample A Female 26.4
Sample B Female 23.8
Sample C Male 36.0
Sample D Male 27.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.