HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:35.6 nTPM
FANTOM5:90.5 Scaled Tags Per Million
Pig:4.6 nTPM
Mouse:0.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033770
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
2148 Female, age 91, left hemisphere 28.1
1855 Male, age 76, left hemisphere 28.0
1898 Male, age 80, left hemisphere 26.4
2529 Female, age 94, left hemisphere 25.9
1911 Female, age 85, right hemisphere 24.2
2621 Female, age 67, right hemisphere 21.5
Dentate gyrus
nTPM: 25.9
2010 Male, age 76, both hemispheres 34.6
2528 Male, age 74, both hemispheres 29.0
2530 Female, age 94, left hemisphere 28.9
2246 Female, age 85, both hemispheres 23.7
1927 Female, age 91, both hemispheres 20.1
2531 Female, age 67, both hemispheres 19.4
Entorhinal gyrus
nTPM: 23.8
2117 Female, age 91, right hemisphere 37.5
1787 Male, age 76, left hemisphere 24.1
2764 Male, age 80, right hemisphere 21.4
2613 Female, age 94, left hemisphere 20.9
2686 Male, age 75, right hemisphere 19.8
1938 Female, age 85, left hemisphere 19.0
Hippocampus, CA1
nTPM: 27.7
2045 Male, age 76, both hemispheres 32.0
2527 Male, age 74, both hemispheres 31.3
2082 Female, age 91, right hemisphere 27.9
2749 Male, age 80, left hemisphere 25.5
1873 Female, age 85, both hemispheres 21.8
Hippocampus, CA2
nTPM: 24.6
2113 Female, age 91, right hemisphere 30.0
2249 Male, age 74, both hemispheres 29.1
1940 Female, age 85, left hemisphere 23.5
1963 Male, age 80, left hemisphere 23.3
2437 Female, age 94, left hemisphere 23.2
1892 Male, age 76, both hemispheres 18.4
Hippocampus, CA3
nTPM: 24.0
2137 Male, age 80, left hemisphere 26.5
2436 Male, age 74, both hemispheres 25.8
1891 Female, age 85, both hemispheres 25.6
1867 Male, age 76, both hemispheres 24.7
2861 Female, age 67, both hemispheres 21.1
2620 Female, age 94, left hemisphere 20.6
Parahippocampal cortex
nTPM: 24.2
2018 Male, age 76, both hemispheres 39.2
2250 Female, age 67, right hemisphere 26.9
1990 Female, age 91, right hemisphere 24.9
2245 Female, age 91, both hemispheres 24.2
2692 Male, age 74, both hemispheres 23.6
2622 Female, age 67, right hemisphere 21.2
2532 Female, age 72, left hemisphere 21.1
1850 Male, age 80, both hemispheres 20.6
1933 Female, age 85, both hemispheres 20.5
2693 Female, age 94, both hemispheres 19.8
Perirhinal gyrus
nTPM: 20.3
1794 Male, age 80, right hemisphere 21.9
1841 Female, age 85, right hemisphere 21.3
1847 Female, age 91, left hemisphere 21.2
2521 Female, age 94, right hemisphere 19.9
2848 Male, age 76, right hemisphere 17.3
Subiculum
nTPM: 27.3
2729 Female, age 91, right hemisphere 32.8
2042 Male, age 76, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.0
2619 Male, age 74, both hemispheres 27.1
2438 Female, age 94, left hemisphere 24.8
1977 Female, age 85, both hemispheres 22.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 460.7
Min nTPM: 3.1
Std nTPM: 47.1
Median nTPM: 19.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 460.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 218.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 191.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 171.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 163.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 144.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 143.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 142.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 137.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 119.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 114.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.5
FF:10153-102I9 76 years, female 97.3
FF:10169-103B7 60 years, female 83.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 3.9
Sample C Male 3.0
Sample D Male 4.8
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.5
Sample A Female 3.7
Sample B Female 3.5
Sample C Male 3.6
Sample D Male 4.5
Subiculum
nTPM: 4.6
Samples: 4

Max nTPM: 5.7
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 4.8
Sample C Male 5.0
Sample D Male 5.7
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.6
Sample A Female 4.0
Sample B Female 5.7
Sample C Male 3.6
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 0.4
Sample C Female 1.0
Sample D Female 1.1
Hippocampal formation
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.2
Sample A Male 0.5
Sample B Male 0.2
Sample C Female 0.2
Sample D Female 0.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71723863 Antisense, RP_050921_01_A09, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.