HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:29.3 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:55.7 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031406
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
2621 Female, age 67, right hemisphere 18.6
1911 Female, age 85, right hemisphere 17.0
2148 Female, age 91, left hemisphere 15.5
2529 Female, age 94, left hemisphere 15.2
1855 Male, age 76, left hemisphere 14.4
1898 Male, age 80, left hemisphere 13.1
Dentate gyrus
nTPM: 16.3
2530 Female, age 94, left hemisphere 20.5
2531 Female, age 67, both hemispheres 20.2
2246 Female, age 85, both hemispheres 17.3
2528 Male, age 74, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.0
2010 Male, age 76, both hemispheres 12.6
Entorhinal gyrus
nTPM: 22.0
2613 Female, age 94, left hemisphere 30.6
2764 Male, age 80, right hemisphere 28.3
2686 Male, age 75, right hemisphere 19.6
1938 Female, age 85, left hemisphere 18.5
2117 Female, age 91, right hemisphere 17.6
1787 Male, age 76, left hemisphere 17.5
Hippocampus, CA1
nTPM: 14.4
2082 Female, age 91, right hemisphere 17.7
2749 Male, age 80, left hemisphere 17.1
1873 Female, age 85, both hemispheres 14.4
2527 Male, age 74, both hemispheres 14.1
2045 Male, age 76, both hemispheres 8.7
Hippocampus, CA2
nTPM: 16.4
2437 Female, age 94, left hemisphere 23.7
2249 Male, age 74, both hemispheres 16.7
1940 Female, age 85, left hemisphere 15.9
2113 Female, age 91, right hemisphere 15.3
1963 Male, age 80, left hemisphere 15.2
1892 Male, age 76, both hemispheres 11.7
Hippocampus, CA3
nTPM: 17.3
2620 Female, age 94, left hemisphere 24.9
1891 Female, age 85, both hemispheres 20.0
2137 Male, age 80, left hemisphere 17.0
2861 Female, age 67, both hemispheres 17.0
1867 Male, age 76, both hemispheres 12.5
2436 Male, age 74, both hemispheres 12.4
Parahippocampal cortex
nTPM: 20.1
2693 Female, age 94, both hemispheres 25.6
2532 Female, age 72, left hemisphere 22.8
2692 Male, age 74, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.8
2622 Female, age 67, right hemisphere 20.5
2245 Female, age 91, both hemispheres 20.4
1850 Male, age 80, both hemispheres 19.0
2250 Female, age 67, right hemisphere 17.9
1933 Female, age 85, both hemispheres 15.9
2018 Male, age 76, both hemispheres 15.2
Perirhinal gyrus
nTPM: 19.5
2521 Female, age 94, right hemisphere 28.0
1794 Male, age 80, right hemisphere 19.8
2848 Male, age 76, right hemisphere 18.6
1847 Female, age 91, left hemisphere 16.4
1841 Female, age 85, right hemisphere 15.0
Subiculum
nTPM: 20.4
1901 Male, age 80, both hemispheres 23.5
2042 Male, age 76, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.9
1977 Female, age 85, both hemispheres 22.0
2619 Male, age 74, both hemispheres 18.0
2729 Female, age 91, right hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 75.7
Min nTPM: 8.3
Std nTPM: 10.9
Median nTPM: 28.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 75.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 59.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 59.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 57.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 55.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 54.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 50.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 49.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 48.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.4
FF:10153-102I9 76 years, female 54.7
FF:10169-103B7 60 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 39.3
Min nTPM: 20.6
Sample A Female 39.3
Sample B Female 31.3
Sample C Male 25.4
Sample D Male 20.6
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.8
Sample A Female 22.5
Sample B Female 17.8
Sample C Male 21.5
Sample D Male 19.3
Subiculum
nTPM: 21.6
Samples: 4

Max nTPM: 27.6
Min nTPM: 17.9
Sample A Female 27.6
Sample B Female 18.2
Sample C Male 22.8
Sample D Male 17.9
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 33.5
Min nTPM: 15.6
Sample A Female 30.5
Sample B Female 15.6
Sample C Male 33.5
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.3
Samples: 4

Max nTPM: 57.6
Min nTPM: 47.7
Sample A Male 47.7
Sample B Male 49.3
Sample C Female 50.6
Sample D Female 57.6
Hippocampal formation
nTPM: 55.7
Samples: 4

Max nTPM: 59.6
Min nTPM: 49.1
Sample A Male 49.1
Sample B Male 58.1
Sample C Female 59.6
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
532674 Antisense, RP_040825_01_C09, Mouse strain C57BL/6J (56 days, male) 6.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.