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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:260.2 nTPM
HPA:260.2 nTPM
GTEx:250.5 nTPM
FANTOM5:168.9 Scaled Tags Per Million
Pig:122.9 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 260.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 250.7
1981 Female, age 72, midline 264.9
2194 Female, age 79, both hemispheres 252.2
2565 Male, age 75, midline 250.4
2048 Male, age 55, midline 246.3
2816 Male, age 47, midline 239.9
Cervical spinal cord, dorsal horn
nTPM: 260.2
2173 Female, age 72, unknown 274.0
2069 Male, age 47, both hemispheres 265.4
2296 Male, age 66, both hemispheres 258.5
2297 Male, age 75, both hemispheres 258.2
1877 Male, age 55, unknown 255.5
2721 Male, age 90, both hemispheres 249.5
Cervical spinal cord, ventral horn
nTPM: 253.9
2098 Female, age 72, unknown 261.2
2480 Male, age 75, both hemispheres 257.1
2809 Male, age 90, both hemispheres 257.0
2068 Male, age 55, unknown 254.0
2295 Male, age 66, both hemispheres 250.6
2820 Female, age 79, both hemispheres 243.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 250.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 250.5
Samples: 159

Max nTPM: 445.8
Min nTPM: 114.2
Std nTPM: 56.0
Median nTPM: 239.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 445.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 420.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 393.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 387.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 385.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 360.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 355.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 353.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 344.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 343.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 342.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 340.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 338.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 337.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 334.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 328.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 323.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 321.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 320.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 318.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 315.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 313.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 311.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 310.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 308.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 306.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 302.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 300.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 299.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 299.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 298.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 298.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 296.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 295.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 294.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 292.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 290.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 288.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 286.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 282.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 281.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 280.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 280.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 279.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 279.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 279.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 277.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 277.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 275.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 273.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 272.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 271.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 270.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 269.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 269.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 267.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 266.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 266.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 265.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 264.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 264.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 259.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 259.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 256.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 255.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 255.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 253.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 251.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 249.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 248.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 248.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 248.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 248.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 245.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 244.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 243.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 242.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 242.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 239.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 239.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 238.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 238.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 235.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 235.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 235.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 235.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 234.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 233.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 233.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 232.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 231.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 230.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 229.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 228.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 228.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 227.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 225.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 224.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 222.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 222.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 221.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 221.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 221.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 219.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 218.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 218.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 217.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 217.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 216.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 216.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 216.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 214.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 214.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 214.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 214.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 213.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 211.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 207.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 207.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 207.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 207.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 206.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 205.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 205.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 204.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 204.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 204.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 201.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 200.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 200.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 200.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 199.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 199.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 199.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 199.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 198.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 197.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 197.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 194.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 193.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 193.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 192.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 190.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 190.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 188.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 188.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 187.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 186.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 184.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 183.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 180.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 176.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 175.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 174.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 172.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 156.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 149.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 146.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 114.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 168.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 168.9
FF:10181-103D1 60 years, female 191.7
FF:10159-103A6 76 years, female 146.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 122.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 116.9
Samples: 4

Max nTPM: 122.8
Min nTPM: 113.1
Sample A Female 117.7
Sample B Female 113.1
Sample C Male 114.0
Sample D Male 122.8
Ventral spinal cord
nTPM: 122.9
Samples: 4

Max nTPM: 135.4
Min nTPM: 107.6
Sample A Female 107.6
Sample B Female 135.4
Sample C Male 129.3
Sample D Male 119.3

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