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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:43.6 nTPM
GTEx:43.6 nTPM
FANTOM5:50.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041746Antibody HPA043227
Squamous epithelial cells LowHigh




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 43.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 43.6
Samples: 156

Max nTPM: 127.0
Min nTPM: 26.3
Std nTPM: 10.6
Median nTPM: 42.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 127.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 72.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 63.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 63.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 61.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 61.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 61.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 60.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 60.1
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 57.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 57.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 56.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 56.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 55.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 55.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 54.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 54.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 54.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 53.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 53.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 53.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 52.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 52.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 52.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 52.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 51.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 50.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 50.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 50.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 50.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 49.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 49.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 49.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 49.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 49.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 49.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 48.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 48.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 48.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 48.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 48.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 47.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 46.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 46.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 46.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 46.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 46.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 46.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 46.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 45.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 45.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 45.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 45.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 45.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 44.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 44.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 44.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 44.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 43.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 43.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 43.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 43.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 43.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 43.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 43.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 43.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 43.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 43.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 43.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 43.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 43.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 43.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 43.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 43.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 42.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 42.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 42.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 42.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 42.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 42.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 42.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 42.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 42.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 41.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 41.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 41.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 41.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 41.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 41.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 41.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 41.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 40.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 40.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 40.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 40.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 40.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 40.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 39.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 39.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 39.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 39.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 39.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 39.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 39.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 38.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 38.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 38.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 38.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 38.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 37.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 37.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 37.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 37.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 37.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 37.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 36.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 36.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 36.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 36.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 36.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 36.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 36.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 36.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 36.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 35.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 35.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 35.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 35.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 35.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 35.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 35.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 35.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 34.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 34.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 34.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 34.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 34.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 34.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 34.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 34.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 33.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 33.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 33.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 33.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 32.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 32.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 32.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 32.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 31.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 31.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 29.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 29.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 28.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 27.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 27.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 26.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 50.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 50.1
FF:10204-103F6 68 years, female 50.1

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