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FTH1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:3756.9 nTPM
FANTOM5:107.7 Scaled Tags Per Million
Pig:7.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB008623
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3756.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3756.9
Samples: 246

Max nTPM: 9644.0
Min nTPM: 1606.8
Std nTPM: 1206.5
Median nTPM: 3545.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9644.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 8446.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7217.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6953.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 6335.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 6297.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 6291.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6200.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6178.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 6074.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6071.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6052.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 5951.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 5885.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 5862.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 5762.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5734.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 5728.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 5643.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 5612.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 5604.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5556.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5546.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 5514.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5463.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 5462.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5433.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 5423.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 5390.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5350.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5326.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 5262.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 5183.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 5162.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 5155.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 5094.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5060.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 5034.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 4989.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 4961.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 4924.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4919.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 4891.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 4839.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 4835.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 4765.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 4759.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 4699.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 4697.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 4664.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 4646.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4620.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 4538.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 4516.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4482.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 4472.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4402.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4389.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4373.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4373.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4368.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 4337.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 4337.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4334.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4328.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 4321.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4300.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 4291.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 4280.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 4240.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4225.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4210.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4203.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 4192.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 4185.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4182.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 4169.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4146.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 4119.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 4112.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4106.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 4105.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 4087.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4066.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 4041.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 4041.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4036.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 4024.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 3994.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 3991.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 3965.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 3962.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 3960.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 3946.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 3946.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 3945.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3934.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 3928.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3917.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 3848.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 3833.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 3790.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 3781.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3778.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 3776.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 3771.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3764.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3739.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3739.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 3660.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3654.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 3651.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 3649.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3628.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 3598.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 3598.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 3593.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 3584.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 3582.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3579.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 3572.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 3559.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3553.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 3537.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3528.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3527.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3497.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3487.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 3471.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3456.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 3446.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3418.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 3415.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3414.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3387.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 3385.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3381.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3336.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3335.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 3330.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 3313.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3312.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 3300.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 3285.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 3282.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3280.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 3242.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 3232.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3222.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 3191.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3191.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 3190.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 3181.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 3179.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3175.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 3174.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3164.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3155.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 3144.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 3130.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 3125.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 3103.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3102.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 3098.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 3093.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 3084.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 3074.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3067.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 3064.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 3055.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3032.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3027.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3012.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3011.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3002.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2989.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2968.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 2947.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 2935.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2918.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2907.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 2886.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2880.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2880.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 2861.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2858.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2853.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2841.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2807.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2794.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 2781.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2767.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 2765.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2759.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2738.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2731.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2724.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2719.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2708.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2701.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2688.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2686.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2684.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 2657.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2657.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 2624.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 2618.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 2615.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 2576.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 2574.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 2567.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2562.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2555.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2552.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2550.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2534.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2533.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2529.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 2527.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2520.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2495.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2425.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2406.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2364.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2354.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2341.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 2336.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2305.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 2296.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 2279.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2275.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2230.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 2229.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2213.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2191.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2186.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 2169.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 2132.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 2121.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2102.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 2063.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2055.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2052.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 2021.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1819.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1606.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 107.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 107.7
FF:10164-103B2 76 years, female 107.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 7.2
Pig sample Sample description nTPM
Caudate
nTPM: 7.2
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.8
Sample A Female 7.0
Sample B Female 7.2
Sample C Male 5.8
Sample D Male 8.6

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