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SLC3A2
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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bowman's capsule: Not detected
Cells in glomeruli: Not detected
Collecting ducts: Not detected
Distal tubules: Low
Proximal tubules (cell body): High
Proximal tubules (microvilli): Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:171.2 nTPM
HPA:152.5 nTPM
GTEx:171.2 nTPM
FANTOM5:211.5 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA017980Antibody CAB010455
Bowman's capsule -Not detected
Cells in glomeruli Not detectedNot detected
Cells in tubules High-
Collecting ducts -Not detected
Distal tubules -Low
Proximal tubules (cell body) -High
Proximal tubules (microvilli) -Not detected





KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 152.5
overview
Female, age 58
Kidney sample 55
nTPM: 179
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 227.4
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 53.9
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 265.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 54.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 93.6
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 350.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 90.5
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 57.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 171.2
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 171.2
Samples: 85

Max nTPM: 322.2
Min nTPM: 45.9
Std nTPM: 62.5
Median nTPM: 168.4
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 322.2
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 317.0
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 282.6
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 282.6
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 272.3
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 255.6
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 254.8
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 253.9
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 246.7
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 246.1
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 245.5
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 244.0
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 243.7
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 242.0
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 238.6
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 236.4
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 223.9
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 223.3
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 222.7
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 222.5
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 217.2
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 216.9
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 216.6
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 214.9
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 210.6
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 210.0
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 204.0
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 203.0
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 202.9
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 200.2
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 200.0
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 197.3
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 196.7
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 194.0
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 193.0
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 187.3
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 181.7
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 178.9
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 173.3
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 172.2
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 171.8
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 170.5
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 168.4
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 166.5
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 164.8
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 164.0
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 163.8
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 163.8
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 160.2
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 157.9
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 156.1
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 154.6
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 149.1
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 147.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 144.2
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 141.0
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 139.3
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 134.6
GTEX-O5YV-1226-SM-EV795 60-69 years, female 131.4
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 129.7
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 126.7
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 124.4
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 122.4
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 122.2
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 122.2
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 120.1
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 118.5
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 112.3
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 111.8
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 110.1
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 109.6
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 106.6
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 105.6
GTEX-14C39-2126-SM-664OH 40-49 years, male 104.8
GTEX-12696-0926-SM-5FQTV 60-69 years, male 102.0
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 95.8
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 88.2
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 81.2
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 80.4
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 70.5
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 69.4
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 63.8
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 56.1
GTEX-RN64-1626-SM-48FD7 50-59 years, male 52.7
GTEX-13112-2126-SM-5GCO4 50-59 years, male 45.9
Show allShow less
Kidney - Medulla
Average nTPM: 121.7
Samples: 4

Max nTPM: 178.7
Min nTPM: 43.9
Std nTPM: 51.4
Median nTPM: 132.1
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 178.7
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 155.2
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 109.0
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 43.9

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 211.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 211.5
FF:10017-101C8 60,62,63 years, female 211.5

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