HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:14.0 nTPM
FANTOM5:8.1 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:12.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040128
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2529 Female, age 94, left hemisphere 27.0
2621 Female, age 67, right hemisphere 26.4
1855 Male, age 76, left hemisphere 25.7
2148 Female, age 91, left hemisphere 25.0
1898 Male, age 80, left hemisphere 23.2
1911 Female, age 85, right hemisphere 22.8
Dentate gyrus
nTPM: 24.3
2530 Female, age 94, left hemisphere 26.8
1927 Female, age 91, both hemispheres 24.9
2531 Female, age 67, both hemispheres 24.9
2010 Male, age 76, both hemispheres 23.5
2528 Male, age 74, both hemispheres 23.2
2246 Female, age 85, both hemispheres 22.6
Entorhinal gyrus
nTPM: 26.0
2686 Male, age 75, right hemisphere 27.9
2764 Male, age 80, right hemisphere 27.4
1787 Male, age 76, left hemisphere 26.8
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 24.8
2117 Female, age 91, right hemisphere 23.3
Hippocampus, CA1
nTPM: 24.1
2045 Male, age 76, both hemispheres 27.6
1873 Female, age 85, both hemispheres 23.8
2527 Male, age 74, both hemispheres 23.4
2082 Female, age 91, right hemisphere 23.1
2749 Male, age 80, left hemisphere 22.5
Hippocampus, CA2
nTPM: 23.9
2437 Female, age 94, left hemisphere 26.2
1892 Male, age 76, both hemispheres 25.1
1940 Female, age 85, left hemisphere 24.2
1963 Male, age 80, left hemisphere 23.5
2113 Female, age 91, right hemisphere 22.6
2249 Male, age 74, both hemispheres 21.5
Hippocampus, CA3
nTPM: 24.6
2861 Female, age 67, both hemispheres 28.8
2620 Female, age 94, left hemisphere 28.5
1867 Male, age 76, both hemispheres 24.3
1891 Female, age 85, both hemispheres 23.3
2436 Male, age 74, both hemispheres 21.7
2137 Male, age 80, left hemisphere 21.2
Parahippocampal cortex
nTPM: 25.9
2622 Female, age 67, right hemisphere 28.9
2532 Female, age 72, left hemisphere 28.3
2692 Male, age 74, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.5
2250 Female, age 67, right hemisphere 25.7
2245 Female, age 91, both hemispheres 25.4
1933 Female, age 85, both hemispheres 25.2
2693 Female, age 94, both hemispheres 24.4
1850 Male, age 80, both hemispheres 24.3
2018 Male, age 76, both hemispheres 22.8
Perirhinal gyrus
nTPM: 25.8
2848 Male, age 76, right hemisphere 27.4
1847 Female, age 91, left hemisphere 26.5
1841 Female, age 85, right hemisphere 26.2
1794 Male, age 80, right hemisphere 24.9
2521 Female, age 94, right hemisphere 23.7
Subiculum
nTPM: 24.1
2438 Female, age 94, left hemisphere 25.9
2619 Male, age 74, both hemispheres 25.4
1977 Female, age 85, both hemispheres 24.1
2729 Female, age 91, right hemisphere 23.7
1901 Male, age 80, both hemispheres 23.3
2042 Male, age 76, both hemispheres 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 68.8
Min nTPM: 6.0
Std nTPM: 6.4
Median nTPM: 13.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 68.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 64.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 36.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 30.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 26.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 22.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 22.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 20.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.1
FF:10153-102I9 76 years, female 10.0
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.8
Sample A Female 8.7
Sample B Female 6.7
Sample C Male 7.2
Sample D Male 5.8
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.2
Sample A Female 8.8
Sample B Female 7.2
Sample C Male 8.7
Sample D Male 7.9
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.0
Sample A Female 9.9
Sample B Female 6.0
Sample C Male 7.3
Sample D Male 7.0
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 10.1
Min nTPM: 5.0
Sample A Female 7.0
Sample B Female 5.0
Sample C Male 10.1
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 12.0
Sample A Male 12.8
Sample B Male 12.0
Sample C Female 12.4
Sample D Female 13.1
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.8
Sample A Male 13.6
Sample B Male 9.8
Sample C Female 12.0
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71492892 Antisense, RP_050913_01_G03, Mouse strain C57BL/6J (56 days, male) 0.1

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