COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:103.7 nTPM
HPA:18.5 nTPM
GTEx:103.7 nTPM
FANTOM5:70.8 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 18.5
overview
Male, age 54 		Colon sample 67
nTPM: 23.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 18
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 15.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 28.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 8.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 19
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 12.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 22
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 24.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 103.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 103.7
Samples: 373

Max nTPM: 204.8
Min nTPM: 22.3
Std nTPM: 29.8
Median nTPM: 102.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 204.8
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 185.4
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 183.7
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 181.6
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 178.9
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 177.3
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 168.0
GTEX-18465-2726-SM-7LT9I 50-59 years, male 167.5
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 163.5
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 163.2
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 163.0
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Colon - Transverse
Average nTPM: 63.8
Samples: 406

Max nTPM: 193.5
Min nTPM: 13.2
Std nTPM: 34.9
Median nTPM: 56.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 193.5
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 161.6
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 157.4
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 154.2
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 149.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 144.9
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 144.3
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 143.4
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 139.4
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 138.5
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 137.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 70.8
FF:10014-101C5 62,83,84 years, mixed 70.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.