HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.3 nTPM
HPA:50.3 nTPM
GTEx:33.5 nTPM
FANTOM5:31.4 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:22.4 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047386
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
2529 Female, age 94, left hemisphere 57.2
1898 Male, age 80, left hemisphere 50.9
1855 Male, age 76, left hemisphere 49.6
2148 Female, age 91, left hemisphere 48.7
2621 Female, age 67, right hemisphere 47.7
1911 Female, age 85, right hemisphere 47.4
Dentate gyrus
nTPM: 46.3
2528 Male, age 74, both hemispheres 53.2
2010 Male, age 76, both hemispheres 51.2
2531 Female, age 67, both hemispheres 46.1
2246 Female, age 85, both hemispheres 44.6
1927 Female, age 91, both hemispheres 42.0
2530 Female, age 94, left hemisphere 40.6
Entorhinal gyrus
nTPM: 46.3
2117 Female, age 91, right hemisphere 57.0
2686 Male, age 75, right hemisphere 47.3
1938 Female, age 85, left hemisphere 46.4
1787 Male, age 76, left hemisphere 45.2
2764 Male, age 80, right hemisphere 44.0
2613 Female, age 94, left hemisphere 38.0
Hippocampus, CA1
nTPM: 47.2
2527 Male, age 74, both hemispheres 55.7
1873 Female, age 85, both hemispheres 48.6
2045 Male, age 76, both hemispheres 45.3
2082 Female, age 91, right hemisphere 43.7
2749 Male, age 80, left hemisphere 42.8
Hippocampus, CA2
nTPM: 46.0
2249 Male, age 74, both hemispheres 52.6
1963 Male, age 80, left hemisphere 49.1
2113 Female, age 91, right hemisphere 46.6
2437 Female, age 94, left hemisphere 45.9
1940 Female, age 85, left hemisphere 41.9
1892 Male, age 76, both hemispheres 40.2
Hippocampus, CA3
nTPM: 45.0
2861 Female, age 67, both hemispheres 50.9
1867 Male, age 76, both hemispheres 46.5
2436 Male, age 74, both hemispheres 45.6
2137 Male, age 80, left hemisphere 44.3
1891 Female, age 85, both hemispheres 43.8
2620 Female, age 94, left hemisphere 38.8
Parahippocampal cortex
nTPM: 45.7
2692 Male, age 74, both hemispheres 53.2
2250 Female, age 67, right hemisphere 50.7
2622 Female, age 67, right hemisphere 49.7
2018 Male, age 76, both hemispheres 45.9
1933 Female, age 85, both hemispheres 45.4
2532 Female, age 72, left hemisphere 44.5
2245 Female, age 91, both hemispheres 43.3
1850 Male, age 80, both hemispheres 41.9
1990 Female, age 91, right hemisphere 41.9
2693 Female, age 94, both hemispheres 40.9
Perirhinal gyrus
nTPM: 42.0
1794 Male, age 80, right hemisphere 45.9
1841 Female, age 85, right hemisphere 42.3
2521 Female, age 94, right hemisphere 41.9
1847 Female, age 91, left hemisphere 40.5
2848 Male, age 76, right hemisphere 39.1
Subiculum
nTPM: 48.4
2619 Male, age 74, both hemispheres 59.2
2729 Female, age 91, right hemisphere 56.4
2438 Female, age 94, left hemisphere 46.3
2042 Male, age 76, both hemispheres 44.1
1901 Male, age 80, both hemispheres 43.1
1977 Female, age 85, both hemispheres 41.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.5
Samples: 197

Max nTPM: 124.7
Min nTPM: 7.0
Std nTPM: 19.2
Median nTPM: 29.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 124.7
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 106.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 102.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 94.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 93.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 87.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 76.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 76.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 74.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 71.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.4
FF:10153-102I9 76 years, female 37.7
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.9
Sample A Female 16.4
Sample B Female 14.9
Sample C Male 20.0
Sample D Male 16.7
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 24.9
Min nTPM: 19.1
Sample A Female 24.9
Sample B Female 23.4
Sample C Male 24.9
Sample D Male 19.1
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.5
Sample A Female 27.2
Sample B Female 21.5
Sample C Male 21.6
Sample D Male 23.6
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 28.4
Min nTPM: 16.0
Sample A Female 16.0
Sample B Female 17.7
Sample C Male 28.4
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 27.8
Min nTPM: 19.6
Sample A Male 27.8
Sample B Male 22.7
Sample C Female 19.6
Sample D Female 19.6
Hippocampal formation
nTPM: 16.5
Samples: 4

Max nTPM: 18.4
Min nTPM: 14.4
Sample A Male 18.4
Sample B Male 15.8
Sample C Female 14.4
Sample D Female 17.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
69549299 Antisense, RP_050201_01_A01, Mouse strain C57BL/6J (56 days, male) 2.0
75042270 Antisense, RP_060412_02_D12, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.