HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.1 nTPM
HPA:44.1 nTPM
GTEx:41.5 nTPM
FANTOM5:15.2 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:64.1 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044186Antibody HPA063605
Glial cells Not detectedMedium
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.1
1898 Male, age 80, left hemisphere 45.3
2529 Female, age 94, left hemisphere 42.9
1855 Male, age 76, left hemisphere 42.1
1911 Female, age 85, right hemisphere 41.8
2148 Female, age 91, left hemisphere 41.7
2621 Female, age 67, right hemisphere 38.6
Dentate gyrus
nTPM: 42.1
2528 Male, age 74, both hemispheres 44.9
2530 Female, age 94, left hemisphere 43.7
2010 Male, age 76, both hemispheres 42.5
1927 Female, age 91, both hemispheres 42.2
2246 Female, age 85, both hemispheres 39.9
2531 Female, age 67, both hemispheres 39.7
Entorhinal gyrus
nTPM: 42.6
2764 Male, age 80, right hemisphere 45.2
2117 Female, age 91, right hemisphere 43.7
1787 Male, age 76, left hemisphere 42.6
1938 Female, age 85, left hemisphere 42.3
2686 Male, age 75, right hemisphere 41.1
2613 Female, age 94, left hemisphere 40.8
Hippocampus, CA1
nTPM: 44.1
2749 Male, age 80, left hemisphere 52.3
2045 Male, age 76, both hemispheres 42.6
2527 Male, age 74, both hemispheres 42.4
1873 Female, age 85, both hemispheres 42.1
2082 Female, age 91, right hemisphere 41.0
Hippocampus, CA2
nTPM: 42.8
1963 Male, age 80, left hemisphere 47.2
1892 Male, age 76, both hemispheres 44.7
2249 Male, age 74, both hemispheres 43.1
2437 Female, age 94, left hemisphere 41.4
2113 Female, age 91, right hemisphere 41.3
1940 Female, age 85, left hemisphere 38.8
Hippocampus, CA3
nTPM: 43.8
2137 Male, age 80, left hemisphere 46.5
2436 Male, age 74, both hemispheres 45.6
2620 Female, age 94, left hemisphere 44.1
1867 Male, age 76, both hemispheres 43.4
2861 Female, age 67, both hemispheres 41.9
1891 Female, age 85, both hemispheres 41.0
Parahippocampal cortex
nTPM: 40.9
2250 Female, age 67, right hemisphere 42.1
1933 Female, age 85, both hemispheres 41.9
2692 Male, age 74, both hemispheres 41.6
2018 Male, age 76, both hemispheres 41.3
1990 Female, age 91, right hemisphere 41.1
1850 Male, age 80, both hemispheres 41.0
2622 Female, age 67, right hemisphere 40.7
2245 Female, age 91, both hemispheres 40.4
2532 Female, age 72, left hemisphere 39.6
2693 Female, age 94, both hemispheres 39.1
Perirhinal gyrus
nTPM: 40.9
1794 Male, age 80, right hemisphere 43.0
1847 Female, age 91, left hemisphere 42.2
2521 Female, age 94, right hemisphere 40.7
1841 Female, age 85, right hemisphere 40.1
2848 Male, age 76, right hemisphere 38.7
Subiculum
nTPM: 41.7
1977 Female, age 85, both hemispheres 43.9
1901 Male, age 80, both hemispheres 43.6
2729 Female, age 91, right hemisphere 42.4
2042 Male, age 76, both hemispheres 41.9
2619 Male, age 74, both hemispheres 41.7
2438 Female, age 94, left hemisphere 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.5
Samples: 197

Max nTPM: 78.3
Min nTPM: 17.5
Std nTPM: 9.2
Median nTPM: 40.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 69.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 64.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 58.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 57.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 56.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 56.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 55.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.2
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.2
Sample A Female 10.6
Sample B Female 9.3
Sample C Male 8.2
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 9.7
Min nTPM: 9.1
Sample A Female 9.7
Sample B Female 9.1
Sample C Male 9.7
Sample D Male 9.1
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.4
Sample A Female 11.0
Sample B Female 8.9
Sample C Male 9.3
Sample D Male 8.4
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.6
Sample A Female 9.8
Sample B Female 8.6
Sample C Male 11.0
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 61.0
Min nTPM: 52.3
Sample A Male 52.3
Sample B Male 52.9
Sample C Female 61.0
Sample D Female 57.0
Hippocampal formation
nTPM: 64.2
Samples: 4

Max nTPM: 67.9
Min nTPM: 58.1
Sample A Male 66.8
Sample B Male 58.1
Sample C Female 67.9
Sample D Female 63.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68161470 Antisense, RP_041122_01_D11, Mouse strain C57BL/6J (56 days, male) 3.0

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