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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA031131
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 535.0
Min nTPM: 137.6
Std nTPM: 81.1
Median nTPM:
352_1
62 years, male
535.0
355_1
70 years, female
517.1
356_1
87 years, female
511.2
319_1
81 years, male
452.7
375_1
74 years, female
449.4
218_1
71 years, female
420.1
350_1
84 years, female
414.9
347_1
72 years, male
413.9
394_1
75 years, female
400.7
425_1
59 years, female
395.4
414_1
84 years, female
392.6
172_1
72 years, female
392.1
354_1
81 years, female
386.5
386_1
76 years, male
381.7
353_1
82 years, female
374.6
384_1
83 years, male
374.6
163_1
78 years, male
372.1
246_1
77 years, male
367.9
377_1
82 years, female
367.8
99_1
64 years, male
367.0
447_1
81 years, male
366.6
490_1
67 years, female
366.0
389_1
86 years, female
365.0
42_1
85 years, male
356.5
243_1
75 years, male
353.8
468_1
89 years, male
350.1
321_1
62 years, female
349.4
415_1
77 years, female
345.8
349_1
83 years, male
345.1
265_1
87 years, male
341.1
254_1
77 years, female
331.1
266_1
85 years, male
326.6
351_1
91 years, male
324.5
35_1
74 years, female
319.1
177_1
74 years, male
317.9
404_1
82 years, female
315.1
6_1
73 years, female
312.2
396_1
62 years, male
310.2
237_1
82 years, male
309.7
307_1
66 years, female
309.4
379_1
60 years, male
301.1
526_1
61 years, male
300.2
318_1
68 years, male
300.0
491_1
89 years, female
292.9
229_1
69 years, female
285.4
292_1
71 years, male
282.5
315_1
62 years, female
280.7
503_1
68 years, male
279.3
286_1
68 years, female
278.4
480_1
63 years, male
278.1
466_1
57 years, female
277.9
413_1
59 years, female
273.1
335_1
73 years, female
270.2
499_1
55 years, female
268.9
291_1
76 years, male
265.1
317_1
60 years, male
264.5
173_1
67 years, male
264.4
217_1
76 years, male
264.2
32_1
67 years, male
259.5
517_1
88 years, male
257.0
109_1
81 years, female
256.6
126_1
63 years, male
256.2
189_1
76 years, male
254.4
120_1
70 years, female
253.5
251_1
78 years, male
252.6
115_1
83 years, male
252.4
293_1
68 years, female
250.6
41_1
94 years, female
249.0
324_1
76 years, male
248.9
142_1
61 years, female
248.5
405_1
91 years, male
244.5
9_1
66 years, female
242.3
162_1
79 years, female
242.0
89_1
63 years, male
238.0
406_1
79 years, male
237.9
153_1
70 years, female
235.6
295_1
61 years, female
234.2
320_1
89 years, female
232.7
348_1
84 years, male
232.0
313_1
79 years, female
231.5
322_1
76 years, male
227.2
376_1
75 years, female
225.5
452_1
88 years, female
225.5
4_1
88 years, female
220.8
518_1
75 years, female
218.0
139_1
64 years, female
216.4
316_1
62 years, male
213.8
311_1
78 years, male
211.2
119_1
70 years, female
210.2
264_1
73 years, female
209.2
145_1
84 years, male
207.9
314_1
67 years, male
204.4
117_1
61 years, male
202.0
149_1
88 years, male
201.1
18_1
88 years, male
201.0
17_1
71 years, male
196.8
2_1
77 years, female
192.8
506_1
65 years, male
191.8
288_1
66 years, female
180.5
137_1
83 years, male
179.0
81_1
67 years, male
172.2
495_1
57 years, female
168.4
43_1
64 years, female
159.3
501_1
88 years, male
148.6
308_1
70 years, female
137.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.