HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:19.0 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:9.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050683
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
2529 Female, age 94, left hemisphere 27.3
1911 Female, age 85, right hemisphere 24.5
1898 Male, age 80, left hemisphere 24.2
2148 Female, age 91, left hemisphere 24.2
2621 Female, age 67, right hemisphere 24.2
1855 Male, age 76, left hemisphere 21.5
Dentate gyrus
nTPM: 24.0
2530 Female, age 94, left hemisphere 25.9
2528 Male, age 74, both hemispheres 25.5
2246 Female, age 85, both hemispheres 23.9
2531 Female, age 67, both hemispheres 23.3
2010 Male, age 76, both hemispheres 23.1
1927 Female, age 91, both hemispheres 22.5
Entorhinal gyrus
nTPM: 23.9
1787 Male, age 76, left hemisphere 25.8
2117 Female, age 91, right hemisphere 25.2
1938 Female, age 85, left hemisphere 23.8
2764 Male, age 80, right hemisphere 23.3
2686 Male, age 75, right hemisphere 22.8
2613 Female, age 94, left hemisphere 22.3
Hippocampus, CA1
nTPM: 23.6
2082 Female, age 91, right hemisphere 26.5
2527 Male, age 74, both hemispheres 24.7
1873 Female, age 85, both hemispheres 23.3
2045 Male, age 76, both hemispheres 22.9
2749 Male, age 80, left hemisphere 20.9
Hippocampus, CA2
nTPM: 26.0
2249 Male, age 74, both hemispheres 31.4
1940 Female, age 85, left hemisphere 28.9
2113 Female, age 91, right hemisphere 25.5
2437 Female, age 94, left hemisphere 24.4
1963 Male, age 80, left hemisphere 23.5
1892 Male, age 76, both hemispheres 22.3
Hippocampus, CA3
nTPM: 24.3
2436 Male, age 74, both hemispheres 29.1
2861 Female, age 67, both hemispheres 24.3
1891 Female, age 85, both hemispheres 24.1
2620 Female, age 94, left hemisphere 24.1
1867 Male, age 76, both hemispheres 23.5
2137 Male, age 80, left hemisphere 20.6
Parahippocampal cortex
nTPM: 23.7
2622 Female, age 67, right hemisphere 24.7
2532 Female, age 72, left hemisphere 24.5
2692 Male, age 74, both hemispheres 24.2
2250 Female, age 67, right hemisphere 23.8
1990 Female, age 91, right hemisphere 23.6
2018 Male, age 76, both hemispheres 23.6
2245 Female, age 91, both hemispheres 23.5
1850 Male, age 80, both hemispheres 23.4
1933 Female, age 85, both hemispheres 22.8
2693 Female, age 94, both hemispheres 22.7
Perirhinal gyrus
nTPM: 23.5
1794 Male, age 80, right hemisphere 25.1
2848 Male, age 76, right hemisphere 23.6
1847 Female, age 91, left hemisphere 23.1
2521 Female, age 94, right hemisphere 23.0
1841 Female, age 85, right hemisphere 22.7
Subiculum
nTPM: 24.4
2438 Female, age 94, left hemisphere 27.6
2619 Male, age 74, both hemispheres 25.5
2729 Female, age 91, right hemisphere 24.3
1977 Female, age 85, both hemispheres 23.6
1901 Male, age 80, both hemispheres 23.1
2042 Male, age 76, both hemispheres 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 50.1
Min nTPM: 5.9
Std nTPM: 7.2
Median nTPM: 17.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 50.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 44.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 39.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 37.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 36.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 34.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 34.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 34.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 33.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 33.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10153-102I9 76 years, female 6.8
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.9
Sample A Female 4.5
Sample B Female 3.0
Sample C Male 4.5
Sample D Male 2.9
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 5.7
Min nTPM: 2.3
Sample A Female 5.7
Sample B Female 3.9
Sample C Male 4.4
Sample D Male 2.3
Subiculum
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.2
Sample A Female 5.6
Sample B Female 4.2
Sample C Male 4.6
Sample D Male 4.5
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.9
Min nTPM: 2.9
Sample A Female 4.9
Sample B Female 3.4
Sample C Male 5.9
Sample D Male 2.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.2
Sample A Male 4.6
Sample B Male 4.2
Sample C Female 6.8
Sample D Female 5.3
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 6.5
Sample A Male 6.5
Sample B Male 7.4
Sample C Female 10.3
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73817984 Antisense, RP_051214_01_A09, Mouse strain C57BL/6J (56 days, male) 0.1
686197 Antisense, RP_040916_01_A05, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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