PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:37.6 nTPM
HPA:37.6 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:6.2 nTPM
Mouse:28.3 nTPM
Allen mouse:0.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 33.8
1984 Male, age 76, both hemispheres 34.4
2188 Female, age 91, both hemispheres 33.9
2090 Male, age 80, both hemispheres 33.6
2301 Female, age 85, both hemispheres 33.2
Area postrema
nTPM: 33.4
2054 Male, age 76, both hemispheres 33.8
2799 Male, age 61, both hemispheres 33.3
2306 Male, age 80, both hemispheres 33.1
Cuneate nuclei
nTPM: 33.6
2131 Male, age 76, both hemispheres 33.8
2381 Male, age 80, both hemispheres 33.5
2376 Male, age 61, both hemispheres 33.4
Dorsal cochlear nucleus
nTPM: 34.0
2058 Male, age 76, both hemispheres 34.6
2187 Female, age 91, both hemispheres 34.5
2370 Male, age 61, both hemispheres 34.0
2802 Male, age 74, right hemisphere 34.0
2378 Male, age 80, both hemispheres 32.9
Dorsal medullary reticular nucleus
nTPM: 34.1
2040 Female, age 85, both hemispheres 35.3
2373 Male, age 61, both hemispheres 33.7
2088 Male, age 76, both hemispheres 33.1
Dorsal motor vagal complex
nTPM: 33.8
2133 Female, age 91, both hemispheres 36.1
2000 Male, age 74, unknown 35.5
2844 Male, age 55, unknown 35.1
2813 Female, age 72, unknown 33.3
2797 Male, age 61, both hemispheres 33.1
2807 Female, age 85, both hemispheres 32.9
2185 Male, age 76, both hemispheres 32.4
2643 Male, age 74, both hemispheres 31.6
Dorsal tegmental nucleus
nTPM: 34.4
1936 Male, age 76, left hemisphere 35.1
2326 Male, age 74, both hemispheres 35.0
2083 Male, age 80, both hemispheres 34.6
2358 Male, age 61, both hemispheres 33.1
Dorsolateral tegmental area
nTPM: 34.5
2654 Male, age 80, both hemispheres 34.9
2141 Male, age 76, both hemispheres 34.5
2751 Female, age 85, both hemispheres 34.5
2337 Male, age 61, both hemispheres 34.4
2360 Male, age 74, both hemispheres 34.1
Gigantocellular reticular nuclei, medullary
nTPM: 34.2
2022 Male, age 76, right hemisphere 35.7
1876 Female, age 85, both hemispheres 34.8
2462 Male, age 74, both hemispheres 34.4
2314 Male, age 61, both hemispheres 34.0
2310 Male, age 80, both hemispheres 33.1
2387 Female, age 91, both hemispheres 33.0
Gigantocellular reticular nuclei, pars
nTPM: 34.0
2168 Male, age 76, both hemispheres 35.2
2084 Female, age 85, both hemispheres 35.0
2336 Male, age 61, both hemispheres 34.1
2330 Male, age 80, both hemispheres 33.0
2706 Male, age 80, both hemispheres 32.9
Inferior olive
nTPM: 33.6
2563 Male, age 74, both hemispheres 34.8
2085 Female, age 85, both hemispheres 34.6
2178 Male, age 61, both hemispheres 34.0
2379 Male, age 80, both hemispheres 32.5
2628 Female, age 91, both hemispheres 32.3
Kolliker-Fuse nucleus
nTPM: 33.6
2315 Male, age 76, right hemisphere 34.1
2163 Male, age 80, both hemispheres 33.9
2793 Female, age 91, left hemisphere 32.9
Lateral lemniscal nuclei
nTPM: 33.8
2169 Male, age 76, both hemispheres 35.5
2453 Male, age 74, right hemisphere 34.4
2746 Female, age 85, left hemisphere 33.6
2036 Male, age 80, both hemispheres 32.9
2320 Female, age 91, left hemisphere 32.6
Lateral medullary reticular nucleus
nTPM: 34.4
2044 Male, age 76, both hemispheres 35.4
2305 Male, age 74, both hemispheres 34.9
2804 Female, age 91, both hemispheres 34.7
2190 Female, age 85, both hemispheres 34.0
2374 Male, age 61, both hemispheres 34.0
2852 Male, age 80, both hemispheres 33.6
Lateral parabrachial nucleus
nTPM: 34.1
2790 Male, age 61, both hemispheres 34.9
2013 Male, age 80, both hemispheres 34.4
2139 Female, age 85, right hemisphere 33.7
2792 Male, age 76, both hemispheres 33.4
Lateral vestibular nucleus
nTPM: 34.5
2184 Male, age 76, both hemispheres 35.5
2311 Male, age 80, both hemispheres 33.6
Locus coeruleus
nTPM: 37.6
2123 Female, age 91, both hemispheres 40.0
1980 Male, age 76, both hemispheres 39.9
2014 Male, age 55, unknown 39.3
2788 Male, age 74, unknown 37.8
2162 Male, age 80, both hemispheres 35.6
2720 Male, age 74, both hemispheres 35.5
2317 Female, age 72, unknown 34.8
Medial olivary nucleus
nTPM: 34.2
1943 Male, age 61, both hemispheres 35.6
2138 Female, age 91, both hemispheres 34.9
2851 Male, age 80, both hemispheres 33.3
1962 Male, age 76, both hemispheres 33.0
Medial parabrachial nucleus
nTPM: 34.5
2156 Male, age 61, both hemispheres 35.6
2170 Female, age 91, both hemispheres 34.8
2786 Male, age 76, both hemispheres 34.6
2463 Female, age 85, right hemisphere 33.8
2854 Male, age 80, both hemispheres 33.5
Medial periolivary nuclei
nTPM: 34.3
2063 Male, age 76, both hemispheres 35.2
2791 Male, age 74, right hemisphere 35.1
2171 Female, age 85, both hemispheres 34.4
2081 Male, age 80, both hemispheres 33.8
2458 Female, age 91, both hemispheres 33.0
Medial vestibular nucleus
nTPM: 35.1
2134 Male, age 76, both hemispheres 35.8
2093 Male, age 80, both hemispheres 35.5
2803 Female, age 91, both hemispheres 35.1
2801 Male, age 74, both hemispheres 35.0
2624 Male, age 61, both hemispheres 34.7
2743 Female, age 85, both hemispheres 34.2
Motor facial nucleus
nTPM: 34.1
2062 Male, age 76, both hemispheres 35.5
2365 Male, age 74, right hemisphere 35.2
2126 Male, age 61, both hemispheres 34.9
2327 Male, age 80, both hemispheres 33.3
2795 Female, age 91, both hemispheres 33.0
2697 Female, age 85, both hemispheres 32.9
Motor hypoglossal nucleus
nTPM: 34.1
2132 Female, age 85, both hemispheres 35.4
2125 Female, age 91, both hemispheres 34.5
2182 Male, age 80, both hemispheres 34.1
2277 Male, age 76, both hemispheres 34.0
2461 Male, age 61, both hemispheres 32.6
Motor trigeminal nucleus
nTPM: 34.1
2335 Male, age 61, both hemispheres 35.4
2309 Male, age 76, both hemispheres 34.6
2079 Male, age 80, both hemispheres 34.3
2560 Male, age 74, both hemispheres 33.4
2321 Female, age 91, both hemispheres 32.9
Nuclei of the trapezoid body
nTPM: 35.2
1983 Male, age 76, both hemispheres 37.6
2159 Male, age 61, both hemispheres 36.6
2735 Female, age 85, both hemispheres 35.8
2166 Male, age 80, both hemispheres 33.4
2368 Female, age 91, both hemispheres 32.8
Nucleus ambiguus
nTPM: 33.9
2096 Female, age 85, both hemispheres 34.1
2071 Male, age 76, both hemispheres 33.7
Nucleus cuneatus
nTPM: 32.9
2562 Male, age 61, both hemispheres 34.4
2564 Male, age 74, both hemispheres 33.4
2100 Male, age 76, both hemispheres 33.2
2380 Male, age 80, both hemispheres 32.5
2805 Female, age 91, both hemispheres 32.1
2808 Female, age 85, both hemispheres 32.0
Nucleus gracilis
nTPM: 32.9
2627 Male, age 74, both hemispheres 34.2
2299 Female, age 85, both hemispheres 32.3
2382 Male, age 80, both hemispheres 32.3
Nucleus raphe magnus
nTPM: 34.9
2160 Male, age 61, both hemispheres 38.2
2455 Male, age 74, both hemispheres 35.3
2172 Female, age 85, both hemispheres 35.1
2051 Male, age 76, both hemispheres 34.2
2328 Male, age 80, both hemispheres 33.6
2459 Female, age 91, both hemispheres 32.8
Nucleus raphe obscurus
nTPM: 33.3
2800 Male, age 61, midline 34.5
2845 Female, age 85, midline 33.3
2142 Male, age 76, midline 32.3
Nucleus raphe pallidus
nTPM: 35.0
1924 Male, age 61, midline 37.1
2183 Male, age 80, midline 34.7
2145 Male, age 76, midline 33.1
Nucleus tractus solitarii
nTPM: 34.8
2144 Female, age 91, right hemisphere 38.6
2656 Male, age 76, both hemispheres 34.1
2307 Male, age 80, both hemispheres 33.8
2191 Female, age 85, both hemispheres 32.6
Paramedian reticular nucleus
nTPM: 34.7
2052 Male, age 76, both hemispheres 35.0
2313 Male, age 61, both hemispheres 35.0
2057 Male, age 80, both hemispheres 34.6
2050 Female, age 85, both hemispheres 34.3
Parvicellular reticular nuclei
nTPM: 34.1
2119 Male, age 80, both hemispheres 34.9
2095 Male, age 76, both hemispheres 34.7
2558 Male, age 74, both hemispheres 32.8
Parvicellular reticular nuclei, medullary
nTPM: 34.7
2189 Female, age 91, both hemispheres 35.4
2091 Female, age 85, both hemispheres 34.5
2181 Male, age 80, left hemisphere 34.3
Peritrigeminal nucleus
nTPM: 35.0
2179 Male, age 61, both hemispheres 35.2
2067 Female, age 85, both hemispheres 35.1
2136 Male, age 76, both hemispheres 34.7
Pontine nuclei
nTPM: 35.0
2727 Male, age 61, right hemisphere 38.8
1968 Male, age 76, left hemisphere 35.4
1863 Male, age 55, unknown 35.3
2109 Female, age 72, unknown 35.3
2787 Female, age 85, both hemispheres 34.9
2454 Male, age 74, left hemisphere 34.2
2319 Female, age 91, both hemispheres 33.1
2115 Male, age 80, left hemisphere 33.0
Pontine raphe nucleus
nTPM: 35.0
2853 Male, age 76, midline 35.3
2122 Female, age 85, midline 34.8
Posteroventral cochlear nucleus
nTPM: 35.2
2752 Female, age 85, both hemispheres 35.6
2070 Male, age 76, both hemispheres 35.3
2341 Male, age 80, both hemispheres 35.3
2135 Female, age 91, both hemispheres 34.9
2371 Male, age 61, both hemispheres 34.9
Prepositus hypoglossal nucleus
nTPM: 34.2
2086 Male, age 80, both hemispheres 34.4
2855 Female, age 85, right hemisphere 34.0
Principal sensory trigeminal nucleus
nTPM: 34.6
2158 Male, age 61, both hemispheres 36.3
2324 Male, age 76, both hemispheres 34.8
2008 Male, age 80, left hemisphere 33.9
2367 Female, age 91, left hemisphere 33.5
Reticular pontine nucleus, caudal
nTPM: 34.0
2092 Male, age 76, both hemispheres 34.8
2559 Male, age 74, both hemispheres 34.6
2332 Male, age 80, right hemisphere 34.3
2457 Female, age 91, both hemispheres 32.4
Reticular pontine nucleus, oral
nTPM: 34.4
1939 Male, age 80, both hemispheres 36.1
2167 Male, age 76, both hemispheres 35.5
2012 Female, age 85, both hemispheres 34.7
2366 Female, age 91, both hemispheres 32.9
2361 Male, age 74, both hemispheres 32.8
Reticulotegmental nucleus
nTPM: 35.2
2452 Male, age 74, both hemispheres 36.4
2322 Female, age 91, both hemispheres 35.2
2325 Male, age 76, both hemispheres 35.1
2333 Male, age 80, both hemispheres 34.1
Spinal trigeminal nucleus, caudal
nTPM: 34.0
2390 Female, age 91, both hemispheres 34.4
2312 Male, age 61, both hemispheres 34.3
2447 Male, age 76, both hemispheres 34.3
2642 Male, age 74, both hemispheres 33.6
2308 Male, age 80, both hemispheres 33.5
Spinal trigeminal nucleus, interpolar
nTPM: 35.5
2066 Male, age 76, right hemisphere 37.9
2625 Male, age 61, both hemispheres 36.2
2386 Female, age 85, both hemispheres 34.9
2033 Male, age 80, both hemispheres 34.8
2389 Female, age 91, both hemispheres 33.5
Spinal trigeminal nucleus, oral
nTPM: 34.7
2737 Female, age 85, both hemispheres 35.2
1978 Male, age 76, both hemispheres 34.7
2164 Male, age 80, both hemispheres 34.2
Spinal vestibular nucleus
nTPM: 34.3
2796 Male, age 61, both hemispheres 35.0
2748 Male, age 76, both hemispheres 34.9
2186 Female, age 91, both hemispheres 34.7
2780 Male, age 80, both hemispheres 34.5
2806 Female, age 85, both hemispheres 34.1
2384 Male, age 74, both hemispheres 32.7
Subcoeruleus area
nTPM: 34.9
2323 Female, age 91, left hemisphere 36.2
1958 Male, age 80, both hemispheres 35.6
2369 Female, age 85, left hemisphere 34.4
2089 Male, age 76, left hemisphere 34.1
2451 Male, age 74, both hemispheres 34.1
Superior olive
nTPM: 34.4
2364 Male, age 74, right hemisphere 35.9
2020 Male, age 76, both hemispheres 34.6
1875 Female, age 85, both hemispheres 34.4
2329 Male, age 80, right hemisphere 33.7
2561 Female, age 91, both hemispheres 33.4
Superior vestibular nucleus
nTPM: 34.6
2015 Male, age 80, both hemispheres 35.0
2383 Male, age 74, both hemispheres 35.0
2061 Male, age 76, both hemispheres 33.7
Ventral medullary reticular nucleus
nTPM: 34.4
2060 Male, age 76, both hemispheres 34.6
2372 Male, age 61, both hemispheres 34.3
Ventral periolivary nuclei
nTPM: 34.5
2165 Male, age 80, both hemispheres 34.9
2023 Male, age 76, both hemispheres 34.8
2794 Female, age 91, left hemisphere 34.6
2130 Female, age 85, both hemispheres 33.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 35.0
2180 Male, age 61, both hemispheres 36.0
2741 Female, age 85, both hemispheres 35.6
1986 Male, age 76, both hemispheres 35.3
2302 Female, age 91, both hemispheres 34.5
2118 Male, age 80, both hemispheres 33.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 34.0
2359 Male, age 61, both hemispheres 35.0
2449 Male, age 74, both hemispheres 34.8
1959 Male, age 76, both hemispheres 34.2
2840 Female, age 85, both hemispheres 33.6
2161 Male, age 80, both hemispheres 33.5
2456 Female, age 91, both hemispheres 32.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 27.4
FF:10182-103D2 60 years, female 28.6
FF:10165-103B3 76 years, female 26.2
Medulla oblongata
Scaled Tags Per Million: 22.7
FF:10174-103C3 60 years, female 30.3
FF:10155-103A2 76 years, female 24.1
FF:10038-101F2 18-64 years, mixed 13.6
Pons
Scaled Tags Per Million: 19.0
FF:10033-101E6 18-54 years, mixed 19.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 6.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 5.6
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.5
Sample A Female 5.5
Sample B Female 5.5
Sample C Male 5.6
Sample D Male 5.9
Pons
nTPM: 6.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.2
Sample A Female 5.2
Sample B Female 5.8
Sample C Male 7.5
Sample D Male 6.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 28.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 28.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 25.7
Sample A Male 29.2
Sample B Male 25.7
Sample C Female 28.9
Sample D Female 29.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
70474887 Antisense, RP_050623_01_C06, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.0
70474887 Antisense, RP_050623_01_C06, Mouse strain C57BL/6J (56 days, male) 0.0

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