HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.7 nTPM
HPA:20.7 nTPM
GTEx:15.4 nTPM
FANTOM5:13.0 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:30.8 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041434Antibody HPA042189
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
1898 Male, age 80, left hemisphere 20.7
2529 Female, age 94, left hemisphere 20.6
2621 Female, age 67, right hemisphere 20.5
1855 Male, age 76, left hemisphere 20.2
2148 Female, age 91, left hemisphere 20.2
1911 Female, age 85, right hemisphere 19.7
Dentate gyrus
nTPM: 20.4
2530 Female, age 94, left hemisphere 21.4
2010 Male, age 76, both hemispheres 21.0
2528 Male, age 74, both hemispheres 20.8
1927 Female, age 91, both hemispheres 20.0
2246 Female, age 85, both hemispheres 19.8
2531 Female, age 67, both hemispheres 19.4
Entorhinal gyrus
nTPM: 20.7
2117 Female, age 91, right hemisphere 22.1
2764 Male, age 80, right hemisphere 22.1
1938 Female, age 85, left hemisphere 21.5
1787 Male, age 76, left hemisphere 21.3
2613 Female, age 94, left hemisphere 19.9
2686 Male, age 75, right hemisphere 17.3
Hippocampus, CA1
nTPM: 20.6
2749 Male, age 80, left hemisphere 22.6
2527 Male, age 74, both hemispheres 20.8
2045 Male, age 76, both hemispheres 20.3
2082 Female, age 91, right hemisphere 19.8
1873 Female, age 85, both hemispheres 19.7
Hippocampus, CA2
nTPM: 20.4
2249 Male, age 74, both hemispheres 21.9
1963 Male, age 80, left hemisphere 21.4
1940 Female, age 85, left hemisphere 20.5
1892 Male, age 76, both hemispheres 19.8
2437 Female, age 94, left hemisphere 19.8
2113 Female, age 91, right hemisphere 19.1
Hippocampus, CA3
nTPM: 19.7
2620 Female, age 94, left hemisphere 21.1
2137 Male, age 80, left hemisphere 20.1
1867 Male, age 76, both hemispheres 20.0
2436 Male, age 74, both hemispheres 19.4
1891 Female, age 85, both hemispheres 19.2
2861 Female, age 67, both hemispheres 18.5
Parahippocampal cortex
nTPM: 19.5
1990 Female, age 91, right hemisphere 21.1
2250 Female, age 67, right hemisphere 20.4
1933 Female, age 85, both hemispheres 20.3
1850 Male, age 80, both hemispheres 19.9
2245 Female, age 91, both hemispheres 19.9
2018 Male, age 76, both hemispheres 19.7
2532 Female, age 72, left hemisphere 19.5
2622 Female, age 67, right hemisphere 18.2
2692 Male, age 74, both hemispheres 18.1
2693 Female, age 94, both hemispheres 17.5
Perirhinal gyrus
nTPM: 20.2
1794 Male, age 80, right hemisphere 21.5
1847 Female, age 91, left hemisphere 20.7
1841 Female, age 85, right hemisphere 20.6
2848 Male, age 76, right hemisphere 19.5
2521 Female, age 94, right hemisphere 18.6
Subiculum
nTPM: 19.9
1977 Female, age 85, both hemispheres 21.5
2619 Male, age 74, both hemispheres 20.7
1901 Male, age 80, both hemispheres 20.0
2729 Female, age 91, right hemisphere 19.6
2042 Male, age 76, both hemispheres 19.3
2438 Female, age 94, left hemisphere 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 23.4
Min nTPM: 10.1
Std nTPM: 2.3
Median nTPM: 15.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 22.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 20.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 20.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 20.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 20.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.0
FF:10153-102I9 76 years, female 16.7
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 19.5
Min nTPM: 12.1
Sample A Female 19.5
Sample B Female 15.4
Sample C Male 15.9
Sample D Male 12.1
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.6
Sample A Female 14.9
Sample B Female 13.6
Sample C Male 13.3
Sample D Male 10.6
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 10.8
Sample A Female 17.8
Sample B Female 11.6
Sample C Male 11.9
Sample D Male 10.8
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 18.2
Min nTPM: 10.8
Sample A Female 15.7
Sample B Female 10.8
Sample C Male 18.2
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 29.1
Min nTPM: 27.6
Sample A Male 29.1
Sample B Male 28.9
Sample C Female 29.1
Sample D Female 27.6
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 32.0
Min nTPM: 28.4
Sample A Male 31.5
Sample B Male 32.0
Sample C Female 31.2
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69014800 Antisense, RP_050310_01_G04, Mouse strain C57BL/6J (56 days, male) 2.7

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