COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:78.0 nTPM
HPA:78.0 nTPM
GTEx:60.6 nTPM
FANTOM5:62.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA037531Antibody HPA037532
Endothelial cells LowNot detected
Glandular cells LowMedium
Peripheral nerve/ganglion MediumLow





COLON - HPA RNA-seqi
Average nTPM 78.0
overview
Male, age 54 		Colon sample 67
nTPM: 74.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 69.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 74.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 70.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 64.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 89.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 89.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 77.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 76
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 97.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 88
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 69.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 71.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 60.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 60.6
Samples: 373

Max nTPM: 154.5
Min nTPM: 27.3
Std nTPM: 15.2
Median nTPM: 60.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 154.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 132.1
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 114.4
GTEX-14E1K-1626-SM-664MO 50-59 years, male 98.3
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 97.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 96.2
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 95.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 93.5
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 90.6
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 90.1
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 90.0
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Colon - Transverse
Average nTPM: 58.7
Samples: 406

Max nTPM: 103.1
Min nTPM: 29.7
Std nTPM: 11.5
Median nTPM: 58.3
GTEX-14JIY-3326-SM-6871E 60-69 years, male 103.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 89.1
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 85.6
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 83.9
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 83.5
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 83.3
GTEX-14E1K-1826-SM-793DT 50-59 years, male 83.0
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 83.0
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 82.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 82.4
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 81.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 62.7
FF:10014-101C5 62,83,84 years, mixed 62.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.