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FAM107A
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1611.9 nTPM
HPA:1611.9 nTPM
FANTOM5:621.7 Scaled Tags Per Million
Allen mouse:0.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1611.9
Sample id Sample description nTPM
Area postrema
nTPM: 1611.9
2799 Male, age 61, both hemispheres 1816.3
2306 Male, age 80, both hemispheres 1551.9
2054 Male, age 76, both hemispheres 1467.6
Cuneate nuclei
nTPM: 1444.0
2376 Male, age 61, both hemispheres 1497.6
2381 Male, age 80, both hemispheres 1428.3
2131 Male, age 76, both hemispheres 1406.1
Dorsal medullary reticular nucleus
nTPM: 1416.3
2373 Male, age 61, both hemispheres 1456.4
2088 Male, age 76, both hemispheres 1400.2
2040 Female, age 85, both hemispheres 1392.3
Dorsal motor vagal complex
nTPM: 1481.9
2797 Male, age 61, both hemispheres 1626.5
2807 Female, age 85, both hemispheres 1541.6
2643 Male, age 74, both hemispheres 1508.7
2813 Female, age 72, unknown 1475.5
2844 Male, age 55, unknown 1453.5
2185 Male, age 76, both hemispheres 1447.9
2000 Male, age 74, unknown 1424.1
2133 Female, age 91, both hemispheres 1377.3
Gigantocellular reticular nuclei, medullary
nTPM: 1440.7
2314 Male, age 61, both hemispheres 1572.5
2462 Male, age 74, both hemispheres 1459.4
2310 Male, age 80, both hemispheres 1434.0
2387 Female, age 91, both hemispheres 1417.6
1876 Female, age 85, both hemispheres 1380.5
2022 Male, age 76, right hemisphere 1380.1
Gigantocellular reticular nuclei, pars
nTPM: 1442.4
2330 Male, age 80, both hemispheres 1485.9
2706 Male, age 80, both hemispheres 1483.2
2168 Male, age 76, both hemispheres 1432.6
2336 Male, age 61, both hemispheres 1417.1
2084 Female, age 85, both hemispheres 1393.0
Inferior olive
nTPM: 1607.2
2379 Male, age 80, both hemispheres 1657.9
2178 Male, age 61, both hemispheres 1648.8
2085 Female, age 85, both hemispheres 1624.6
2628 Female, age 91, both hemispheres 1572.0
2563 Male, age 74, both hemispheres 1533.0
Lateral medullary reticular nucleus
nTPM: 1526.8
2374 Male, age 61, both hemispheres 1602.2
2852 Male, age 80, both hemispheres 1566.9
2804 Female, age 91, both hemispheres 1520.1
2305 Male, age 74, both hemispheres 1519.9
2190 Female, age 85, both hemispheres 1510.8
2044 Male, age 76, both hemispheres 1441.0
Medial vestibular nucleus
nTPM: 1430.9
2624 Male, age 61, both hemispheres 1488.0
2743 Female, age 85, both hemispheres 1464.7
2134 Male, age 76, both hemispheres 1442.6
2801 Male, age 74, both hemispheres 1440.9
2803 Female, age 91, both hemispheres 1376.0
2093 Male, age 80, both hemispheres 1373.4
Motor hypoglossal nucleus
nTPM: 1426.5
2182 Male, age 80, both hemispheres 1468.5
2277 Male, age 76, both hemispheres 1453.4
2461 Male, age 61, both hemispheres 1424.9
2132 Female, age 85, both hemispheres 1405.8
2125 Female, age 91, both hemispheres 1380.0
Nucleus ambiguus
nTPM: 1510.2
2071 Male, age 76, both hemispheres 1598.0
2096 Female, age 85, both hemispheres 1422.4
Nucleus cuneatus
nTPM: 1470.9
2808 Female, age 85, both hemispheres 1543.6
2380 Male, age 80, both hemispheres 1518.4
2562 Male, age 61, both hemispheres 1466.7
2564 Male, age 74, both hemispheres 1457.7
2100 Male, age 76, both hemispheres 1431.5
2805 Female, age 91, both hemispheres 1407.5
Nucleus gracilis
nTPM: 1485.2
2627 Male, age 74, both hemispheres 1493.1
2382 Male, age 80, both hemispheres 1485.6
2299 Female, age 85, both hemispheres 1477.0
Nucleus raphe magnus
nTPM: 1430.7
2051 Male, age 76, both hemispheres 1511.3
2328 Male, age 80, both hemispheres 1434.6
2455 Male, age 74, both hemispheres 1413.4
2459 Female, age 91, both hemispheres 1412.0
2160 Male, age 61, both hemispheres 1408.1
2172 Female, age 85, both hemispheres 1404.5
Nucleus raphe obscurus
nTPM: 1578.1
2142 Male, age 76, midline 1666.7
2845 Female, age 85, midline 1558.1
2800 Male, age 61, midline 1509.5
Nucleus raphe pallidus
nTPM: 1509.8
2145 Male, age 76, midline 1612.6
1924 Male, age 61, midline 1489.1
2183 Male, age 80, midline 1427.8
Nucleus tractus solitarii
nTPM: 1454.2
2307 Male, age 80, both hemispheres 1494.1
2191 Female, age 85, both hemispheres 1493.8
2144 Female, age 91, right hemisphere 1421.5
2656 Male, age 76, both hemispheres 1407.3
Parvicellular reticular nuclei
nTPM: 1449.3
2095 Male, age 76, both hemispheres 1496.8
2119 Male, age 80, both hemispheres 1426.9
2558 Male, age 74, both hemispheres 1424.1
Parvicellular reticular nuclei, medullary
nTPM: 1414.4
2091 Female, age 85, both hemispheres 1422.5
2189 Female, age 91, both hemispheres 1417.2
2181 Male, age 80, left hemisphere 1403.5
Peritrigeminal nucleus
nTPM: 1513.1
2136 Male, age 76, both hemispheres 1537.5
2067 Female, age 85, both hemispheres 1525.1
2179 Male, age 61, both hemispheres 1476.7
Prepositus hypoglossal nucleus
nTPM: 1484.2
2086 Male, age 80, both hemispheres 1495.2
2855 Female, age 85, right hemisphere 1473.2
Spinal trigeminal nucleus, caudal
nTPM: 1433.8
2308 Male, age 80, both hemispheres 1475.1
2312 Male, age 61, both hemispheres 1467.4
2642 Male, age 74, both hemispheres 1434.3
2447 Male, age 76, both hemispheres 1403.0
2390 Female, age 91, both hemispheres 1389.0
Spinal trigeminal nucleus, interpolar
nTPM: 1410.2
2389 Female, age 91, both hemispheres 1425.4
2066 Male, age 76, right hemisphere 1422.1
2033 Male, age 80, both hemispheres 1417.2
2625 Male, age 61, both hemispheres 1400.8
2386 Female, age 85, both hemispheres 1385.7
Spinal vestibular nucleus
nTPM: 1403.6
2806 Female, age 85, both hemispheres 1422.9
2384 Male, age 74, both hemispheres 1420.0
2780 Male, age 80, both hemispheres 1408.0
2748 Male, age 76, both hemispheres 1403.6
2796 Male, age 61, both hemispheres 1400.4
2186 Female, age 91, both hemispheres 1366.9
Ventral medullary reticular nucleus
nTPM: 1483.8
2372 Male, age 61, both hemispheres 1567.8
2060 Male, age 76, both hemispheres 1399.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1497.1
2180 Male, age 61, both hemispheres 1545.1
2302 Female, age 91, both hemispheres 1538.5
2118 Male, age 80, both hemispheres 1503.0
1986 Male, age 76, both hemispheres 1458.7
2741 Female, age 85, both hemispheres 1440.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 621.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 621.7
FF:10038-101F2 18-64 years, mixed 796.7
FF:10155-103A2 76 years, female 724.1
FF:10174-103C3 60 years, female 344.3

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
74431465 Antisense, RP_060207_02_A08, Mouse strain C57BL/6J (56 days, male) 0.1

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