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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:75.4 nTPM
FANTOM5:148.3 Scaled Tags Per Million
Pig:65.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039291Antibody HPA044062Antibody CAB017448
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detected






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 75.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 75.4
Samples: 246

Max nTPM: 436.0
Min nTPM: 34.4
Std nTPM: 46.6
Median nTPM: 64.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 436.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 403.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 312.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 287.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 242.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 222.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 204.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 204.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 173.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 166.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 151.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 136.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 135.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 129.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 127.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 124.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 121.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 116.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 113.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 109.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 107.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 106.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 105.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 99.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 95.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 95.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 93.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 93.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 92.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 90.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 89.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 88.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 88.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 87.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 87.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 87.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 86.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 86.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 86.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 85.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 84.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 83.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 82.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 82.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 81.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 81.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 80.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 79.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 79.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 78.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 78.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 75.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 75.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 74.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 74.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 73.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 73.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 73.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 73.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 72.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 72.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 72.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 72.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 72.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 72.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 71.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 70.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 70.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 70.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 70.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 70.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 70.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 69.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 69.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 69.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 69.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 68.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 68.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 68.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 67.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 67.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 67.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 67.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 67.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 67.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 67.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 66.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 66.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 65.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 65.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 65.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 64.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 64.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 64.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 63.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 63.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 62.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 62.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 62.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 62.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 62.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 61.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 61.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 61.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 61.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 61.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 61.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 60.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 60.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 60.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 60.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 60.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 59.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 59.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 58.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 58.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 58.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 57.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 57.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 57.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 57.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 56.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 56.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 56.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 56.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 54.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 54.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 54.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 54.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 54.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 53.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 53.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 53.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 53.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 53.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 53.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 52.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 52.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 52.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 51.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 51.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 50.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 50.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 45.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 45.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 44.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 44.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 43.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 41.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 41.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 39.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 34.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 148.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 148.3
FF:10164-103B2 76 years, female 148.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 65.4
Pig sample Sample description nTPM
Caudate
nTPM: 65.4
Samples: 4

Max nTPM: 71.2
Min nTPM: 60.1
Sample A Female 65.9
Sample B Female 64.2
Sample C Male 71.2
Sample D Male 60.1

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