COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.1 nTPM
HPA:1.2 nTPM
GTEx:14.1 nTPM
FANTOM5:6.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA069318
Endothelial cells Not detected
Glandular cells Medium
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 1.2
overview
Male, age 54 		Colon sample 67
nTPM: 0.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 2.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.1
Samples: 373

Max nTPM: 140.8
Min nTPM: 0.4
Std nTPM: 14.4
Median nTPM: 10.1
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 140.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 123.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 96.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 69.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 65.0
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 59.6
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 59.4
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 54.6
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 52.5
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 51.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 48.1
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Colon - Transverse
Average nTPM: 6.9
Samples: 406

Max nTPM: 115.9
Min nTPM: 0.2
Std nTPM: 9.5
Median nTPM: 4.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 115.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 57.6
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 53.0
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 52.0
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 45.3
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 41.8
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 41.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 33.6
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 33.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 31.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 28.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 6.8
FF:10014-101C5 62,83,84 years, mixed 6.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.