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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:546.7 nTPM
FANTOM5:103.2 Scaled Tags Per Million
Pig:79.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042575
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 546.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 546.7
Samples: 246

Max nTPM: 2085.2
Min nTPM: 61.2
Std nTPM: 337.1
Median nTPM: 443.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2085.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2015.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1816.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1732.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1503.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1476.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1417.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1374.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1354.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1309.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1266.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1236.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1184.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1170.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1123.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1117.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1095.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1090.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1058.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1048.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1047.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1045.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1013.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1010.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 996.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 961.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 959.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 944.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 937.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 933.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 924.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 920.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 876.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 872.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 870.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 864.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 851.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 837.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 833.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 825.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 821.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 812.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 811.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 802.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 798.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 796.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 792.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 786.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 784.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 777.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 776.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 771.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 767.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 765.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 729.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 728.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 717.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 716.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 711.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 708.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 706.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 697.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 689.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 672.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 669.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 662.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 659.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 658.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 651.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 648.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 643.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 642.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 636.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 633.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 632.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 623.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 622.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 621.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 617.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 613.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 613.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 611.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 608.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 599.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 596.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 596.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 586.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 585.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 571.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 563.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 556.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 542.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 541.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 539.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 537.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 532.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 528.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 526.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 525.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 520.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 519.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 516.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 516.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 516.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 513.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 511.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 506.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 506.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 502.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 501.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 489.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 482.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 481.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 479.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 472.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 471.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 468.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 465.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 460.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 456.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 453.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 448.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 444.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 443.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 440.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 439.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 436.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 436.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 435.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 435.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 434.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 426.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 425.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 424.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 424.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 420.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 412.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 412.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 411.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 407.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 406.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 401.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 399.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 398.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 393.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 393.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 392.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 389.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 386.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 383.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 377.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 374.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 371.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 371.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 371.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 369.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 368.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 362.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 360.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 360.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 359.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 359.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 358.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 358.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 357.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 356.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 355.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 350.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 349.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 348.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 345.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 344.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 343.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 343.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 342.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 335.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 334.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 333.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 331.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 331.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 329.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 328.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 327.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 325.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 320.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 317.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 317.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 315.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 312.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 311.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 308.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 302.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 300.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 299.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 296.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 292.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 292.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 285.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 283.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 283.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 281.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 275.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 270.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 270.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 266.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 262.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 260.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 259.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 259.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 258.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 250.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 246.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 242.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 241.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 240.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 239.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 235.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 234.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 232.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 225.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 220.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 219.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 218.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 216.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 210.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 208.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 206.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 206.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 205.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 205.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 201.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 196.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 194.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 190.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 181.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 176.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 168.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 160.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 150.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 148.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 137.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 126.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 108.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 61.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 103.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 103.2
FF:10164-103B2 76 years, female 103.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 79.8
Pig sample Sample description nTPM
Caudate
nTPM: 79.8
Samples: 4

Max nTPM: 98.7
Min nTPM: 62.4
Sample A Female 62.4
Sample B Female 88.6
Sample C Male 98.7
Sample D Male 69.6

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