HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:32.8 nTPM
FANTOM5:25.4 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:6.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
2529 Female, age 94, left hemisphere 29.7
2148 Female, age 91, left hemisphere 29.2
1898 Male, age 80, left hemisphere 28.1
1855 Male, age 76, left hemisphere 27.5
2621 Female, age 67, right hemisphere 27.5
1911 Female, age 85, right hemisphere 25.4
Dentate gyrus
nTPM: 27.0
2528 Male, age 74, both hemispheres 27.9
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 27.3
2010 Male, age 76, both hemispheres 27.0
1927 Female, age 91, both hemispheres 26.9
2246 Female, age 85, both hemispheres 24.9
Entorhinal gyrus
nTPM: 26.5
2117 Female, age 91, right hemisphere 29.5
1787 Male, age 76, left hemisphere 26.9
2764 Male, age 80, right hemisphere 26.8
2686 Male, age 75, right hemisphere 26.0
2613 Female, age 94, left hemisphere 25.5
1938 Female, age 85, left hemisphere 24.3
Hippocampus, CA1
nTPM: 26.1
2749 Male, age 80, left hemisphere 29.3
2082 Female, age 91, right hemisphere 26.6
2527 Male, age 74, both hemispheres 26.4
1873 Female, age 85, both hemispheres 25.1
2045 Male, age 76, both hemispheres 23.1
Hippocampus, CA2
nTPM: 27.4
1963 Male, age 80, left hemisphere 31.4
2249 Male, age 74, both hemispheres 27.8
2113 Female, age 91, right hemisphere 27.5
1892 Male, age 76, both hemispheres 27.1
2437 Female, age 94, left hemisphere 25.7
1940 Female, age 85, left hemisphere 24.8
Hippocampus, CA3
nTPM: 27.6
2861 Female, age 67, both hemispheres 32.3
2436 Male, age 74, both hemispheres 29.8
2620 Female, age 94, left hemisphere 27.7
2137 Male, age 80, left hemisphere 27.6
1867 Male, age 76, both hemispheres 25.1
1891 Female, age 85, both hemispheres 23.5
Parahippocampal cortex
nTPM: 24.2
2622 Female, age 67, right hemisphere 26.2
2692 Male, age 74, both hemispheres 26.0
2245 Female, age 91, both hemispheres 25.4
1990 Female, age 91, right hemisphere 24.5
2018 Male, age 76, both hemispheres 24.3
2532 Female, age 72, left hemisphere 23.7
1933 Female, age 85, both hemispheres 23.6
2250 Female, age 67, right hemisphere 23.5
1850 Male, age 80, both hemispheres 22.6
2693 Female, age 94, both hemispheres 22.4
Perirhinal gyrus
nTPM: 22.6
1794 Male, age 80, right hemisphere 23.5
1847 Female, age 91, left hemisphere 23.4
2848 Male, age 76, right hemisphere 23.2
1841 Female, age 85, right hemisphere 22.0
2521 Female, age 94, right hemisphere 21.1
Subiculum
nTPM: 26.0
2729 Female, age 91, right hemisphere 28.1
2619 Male, age 74, both hemispheres 26.3
2438 Female, age 94, left hemisphere 25.9
1977 Female, age 85, both hemispheres 25.5
1901 Male, age 80, both hemispheres 25.4
2042 Male, age 76, both hemispheres 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.8
Samples: 197

Max nTPM: 55.0
Min nTPM: 10.1
Std nTPM: 7.2
Median nTPM: 32.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 55.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 53.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 52.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 48.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 48.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 48.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 46.4
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 46.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 46.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.5
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 45.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.4
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 24.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 51.4
Min nTPM: 32.9
Sample A Female 51.4
Sample B Female 42.1
Sample C Male 41.9
Sample D Male 32.9
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 35.7
Sample A Female 41.7
Sample B Female 46.6
Sample C Male 44.0
Sample D Male 35.7
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 52.4
Min nTPM: 33.7
Sample A Female 52.4
Sample B Female 37.0
Sample C Male 38.7
Sample D Male 33.7
Ventral hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 50.4
Min nTPM: 33.3
Sample A Female 41.2
Sample B Female 33.3
Sample C Male 50.4
Sample D Male 46.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.5
Sample A Male 6.0
Sample B Male 5.8
Sample C Female 5.6
Sample D Female 5.5
Hippocampal formation
nTPM: 6.5
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.7
Sample A Male 5.9
Sample B Male 6.6
Sample C Female 5.7
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
67764908 Antisense, RP_040916_02_C03, Mouse strain C57BL/6J (56 days, male) 0.2

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