COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.4 nTPM
HPA:41.4 nTPM
GTEx:40.3 nTPM
FANTOM5:86.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA039163
Endothelial cells Medium
Glandular cells High


COLON - HPA RNA-seqi
Average nTPM 41.4
overview
Male, age 54 		Colon sample 67
nTPM: 49.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 39.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 42.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 42.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 43.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 54.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 44
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 30.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 42.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 42.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 39.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 35
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 31.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 40.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 36.6
Samples: 373

Max nTPM: 111.6
Min nTPM: 13.0
Std nTPM: 10.4
Median nTPM: 36.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 111.6
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 70.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 69.5
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 65.1
GTEX-13OVK-1026-SM-7KFTC 40-49 years, male 63.7
GTEX-1RMOY-1726-SM-EVYC9 50-59 years, male 61.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 58.9
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 58.0
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 57.8
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 57.8
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 56.9
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Colon - Transverse
Average nTPM: 40.3
Samples: 406

Max nTPM: 72.0
Min nTPM: 4.9
Std nTPM: 11.3
Median nTPM: 39.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 72.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 71.3
GTEX-14PK6-1726-SM-6871J 70-79 years, female 70.9
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 70.9
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 70.5
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 68.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 66.1
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 66.1
GTEX-1AYCT-1826-SM-731EG 50-59 years, male 65.2
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 64.6
GTEX-1H3VY-2426-SM-9WPPD 50-59 years, male 64.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 86.1
FF:10014-101C5 62,83,84 years, mixed 86.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.