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CPLX1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:192.7 nTPM
FANTOM5:100.2 Scaled Tags Per Million
Pig:74.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA071191Antibody HPA074390
Glial cells LowLow
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 192.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 192.7
Samples: 246

Max nTPM: 500.4
Min nTPM: 28.1
Std nTPM: 86.8
Median nTPM: 199.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 500.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 436.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 406.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 398.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 380.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 371.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 368.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 364.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 359.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 359.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 352.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 349.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 341.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 338.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 326.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 325.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 309.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 307.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 305.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 304.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 302.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 299.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 298.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 297.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 295.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 294.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 294.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 291.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 291.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 290.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 290.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 288.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 287.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 286.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 284.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 282.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 281.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 279.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 278.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 278.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 278.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 277.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 276.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 272.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 270.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 270.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 269.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 268.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 264.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 264.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 261.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 261.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 259.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 258.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 252.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 251.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 250.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 250.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 249.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 248.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 248.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 247.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 246.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 246.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 246.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 243.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 242.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 242.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 241.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 241.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 240.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 240.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 239.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 238.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 237.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 236.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 235.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 235.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 235.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 234.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 233.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 232.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 232.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 232.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 232.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 229.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 229.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 229.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 226.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 226.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 225.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 225.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 223.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 221.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 221.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 220.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 220.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 220.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 219.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 218.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 218.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 217.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 215.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 215.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 214.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 214.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 214.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 213.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 213.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 211.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 210.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 210.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 209.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 209.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 208.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 208.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 208.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 207.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 207.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 204.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 200.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 200.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 199.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 199.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 199.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 199.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 198.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 198.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 196.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 195.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 193.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 192.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 192.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 192.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 191.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 190.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 188.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 187.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 184.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 182.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 178.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 178.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 177.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 177.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 176.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 169.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 169.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 168.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 167.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 164.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 161.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 161.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 160.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 160.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 158.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 158.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 152.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 150.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 150.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 148.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 146.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 145.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 145.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 144.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 142.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 139.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 138.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 137.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 137.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 135.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 132.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 129.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 126.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 125.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 124.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 123.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 122.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 119.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 115.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 115.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 114.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 113.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 112.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 111.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 111.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 108.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 108.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 103.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 103.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 98.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 98.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 97.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 97.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 97.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 97.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 96.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 93.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 93.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 93.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 91.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 90.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 90.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 88.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 87.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 86.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 86.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 84.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 84.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 82.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 80.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 78.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 77.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 77.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 77.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 69.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 68.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 67.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 61.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 52.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 38.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 38.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 36.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 28.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 100.2
FF:10164-103B2 76 years, female 100.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.2
Pig sample Sample description nTPM
Caudate
nTPM: 74.2
Samples: 4

Max nTPM: 89.6
Min nTPM: 52.6
Sample A Female 52.6
Sample B Female 79.9
Sample C Male 89.6
Sample D Male 74.5

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