HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.0 nTPM
HPA:12.0 nTPM
GTEx:12.1 nTPM
FANTOM5:75.2 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:29.7 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000593Antibody HPA001341Antibody CAB037264
Glial cells HighMediumHigh
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.0
Sample id Sample description nTPM
Hippocampus
nTPM: 8.7
2529 Female, age 94, left hemisphere 12.6
2621 Female, age 67, right hemisphere 12.0
2148 Female, age 91, left hemisphere 8.2
1911 Female, age 85, right hemisphere 7.2
1898 Male, age 80, left hemisphere 6.4
1855 Male, age 76, left hemisphere 5.9
Dentate gyrus
nTPM: 8.3
2531 Female, age 67, both hemispheres 11.4
2530 Female, age 94, left hemisphere 10.1
1927 Female, age 91, both hemispheres 8.7
2246 Female, age 85, both hemispheres 7.0
2528 Male, age 74, both hemispheres 6.6
2010 Male, age 76, both hemispheres 5.9
Entorhinal gyrus
nTPM: 12.0
2613 Female, age 94, left hemisphere 18.6
2686 Male, age 75, right hemisphere 14.8
2764 Male, age 80, right hemisphere 11.8
1938 Female, age 85, left hemisphere 10.8
1787 Male, age 76, left hemisphere 8.8
2117 Female, age 91, right hemisphere 7.3
Hippocampus, CA1
nTPM: 7.2
2082 Female, age 91, right hemisphere 9.3
2527 Male, age 74, both hemispheres 8.9
1873 Female, age 85, both hemispheres 7.1
2749 Male, age 80, left hemisphere 6.9
2045 Male, age 76, both hemispheres 3.8
Hippocampus, CA2
nTPM: 7.6
2113 Female, age 91, right hemisphere 9.3
2437 Female, age 94, left hemisphere 9.1
1940 Female, age 85, left hemisphere 8.9
1963 Male, age 80, left hemisphere 7.7
1892 Male, age 76, both hemispheres 6.3
2249 Male, age 74, both hemispheres 4.2
Hippocampus, CA3
nTPM: 10.8
2620 Female, age 94, left hemisphere 16.8
2861 Female, age 67, both hemispheres 13.6
2137 Male, age 80, left hemisphere 10.5
1891 Female, age 85, both hemispheres 9.2
1867 Male, age 76, both hemispheres 7.9
2436 Male, age 74, both hemispheres 6.8
Parahippocampal cortex
nTPM: 10.3
2622 Female, age 67, right hemisphere 12.4
2245 Female, age 91, both hemispheres 11.9
2693 Female, age 94, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.7
2532 Female, age 72, left hemisphere 10.2
2018 Male, age 76, both hemispheres 10.0
1850 Male, age 80, both hemispheres 9.9
2692 Male, age 74, both hemispheres 9.6
1933 Female, age 85, both hemispheres 9.5
2250 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 10.0
1841 Female, age 85, right hemisphere 11.4
2848 Male, age 76, right hemisphere 11.1
1794 Male, age 80, right hemisphere 9.5
2521 Female, age 94, right hemisphere 9.0
1847 Female, age 91, left hemisphere 8.9
Subiculum
nTPM: 9.4
2619 Male, age 74, both hemispheres 10.5
1901 Male, age 80, both hemispheres 10.4
2438 Female, age 94, left hemisphere 9.2
2042 Male, age 76, both hemispheres 9.1
2729 Female, age 91, right hemisphere 9.1
1977 Female, age 85, both hemispheres 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 30.2
Min nTPM: 7.0
Std nTPM: 2.8
Median nTPM: 11.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 19.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 17.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 17.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.2
FF:10153-102I9 76 years, female 85.6
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 28.1
Min nTPM: 17.6
Sample A Female 28.1
Sample B Female 24.2
Sample C Male 22.2
Sample D Male 17.6
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 25.8
Min nTPM: 22.3
Sample A Female 25.6
Sample B Female 22.6
Sample C Male 25.8
Sample D Male 22.3
Subiculum
nTPM: 23.4
Samples: 4

Max nTPM: 31.5
Min nTPM: 19.5
Sample A Female 31.5
Sample B Female 21.3
Sample C Male 21.4
Sample D Male 19.5
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 30.1
Min nTPM: 18.5
Sample A Female 21.5
Sample B Female 18.5
Sample C Male 30.1
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 34.7
Min nTPM: 26.1
Sample A Male 29.2
Sample B Male 26.1
Sample C Female 28.9
Sample D Female 34.7
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.1
Sample A Male 24.0
Sample B Male 25.1
Sample C Female 25.5
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
79904518 Antisense, RP_071218_03_D12, Mouse strain C57BL/6J (56 days, male) 1.0
79908808 Antisense, RP_071218_03_D12, Mouse strain C57BL/6J (56 days, male) 0.5

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