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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:128.8 nTPM
HPA:128.8 nTPM

PONS - HPA Brain RNA-seq
Max nTPM 128.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 123.7
2301 Female, age 85, both hemispheres 137.9
2188 Female, age 91, both hemispheres 125.2
2090 Male, age 80, both hemispheres 116.5
1984 Male, age 76, both hemispheres 115.2
Dorsal cochlear nucleus
nTPM: 117.2
2802 Male, age 74, right hemisphere 125.1
2378 Male, age 80, both hemispheres 118.0
2058 Male, age 76, both hemispheres 116.1
2187 Female, age 91, both hemispheres 116.1
2370 Male, age 61, both hemispheres 111.0
Dorsal tegmental nucleus
nTPM: 117.7
2358 Male, age 61, both hemispheres 136.1
2326 Male, age 74, both hemispheres 111.9
2083 Male, age 80, both hemispheres 111.7
1936 Male, age 76, left hemisphere 111.2
Dorsolateral tegmental area
nTPM: 116.7
2337 Male, age 61, both hemispheres 137.2
2141 Male, age 76, both hemispheres 125.0
2654 Male, age 80, both hemispheres 108.5
2751 Female, age 85, both hemispheres 107.0
2360 Male, age 74, both hemispheres 105.6
Kolliker-Fuse nucleus
nTPM: 121.6
2793 Female, age 91, left hemisphere 144.8
2163 Male, age 80, both hemispheres 113.4
2315 Male, age 76, right hemisphere 106.7
Lateral lemniscal nuclei
nTPM: 122.3
2320 Female, age 91, left hemisphere 135.3
2453 Male, age 74, right hemisphere 128.7
2169 Male, age 76, both hemispheres 119.3
2746 Female, age 85, left hemisphere 114.4
2036 Male, age 80, both hemispheres 113.9
Lateral parabrachial nucleus
nTPM: 115.4
2792 Male, age 76, both hemispheres 126.1
2790 Male, age 61, both hemispheres 118.8
2013 Male, age 80, both hemispheres 109.5
2139 Female, age 85, right hemisphere 107.2
Lateral vestibular nucleus
nTPM: 128.8
2184 Male, age 76, both hemispheres 136.7
2311 Male, age 80, both hemispheres 120.9
Locus coeruleus
nTPM: 114.1
2720 Male, age 74, both hemispheres 126.7
2162 Male, age 80, both hemispheres 118.7
2788 Male, age 74, unknown 118.7
1980 Male, age 76, both hemispheres 114.0
2317 Female, age 72, unknown 112.1
2014 Male, age 55, unknown 105.3
2123 Female, age 91, both hemispheres 102.8
Medial olivary nucleus
nTPM: 113.2
2851 Male, age 80, both hemispheres 137.0
1962 Male, age 76, both hemispheres 106.6
2138 Female, age 91, both hemispheres 106.4
1943 Male, age 61, both hemispheres 102.8
Medial parabrachial nucleus
nTPM: 119.0
2854 Male, age 80, both hemispheres 126.2
2786 Male, age 76, both hemispheres 126.1
2156 Male, age 61, both hemispheres 122.5
2170 Female, age 91, both hemispheres 117.1
2463 Female, age 85, right hemisphere 103.2
Medial periolivary nuclei
nTPM: 117.5
2458 Female, age 91, both hemispheres 140.6
2081 Male, age 80, both hemispheres 121.3
2171 Female, age 85, both hemispheres 119.6
2791 Male, age 74, right hemisphere 106.7
2063 Male, age 76, both hemispheres 99.1
Motor facial nucleus
nTPM: 121.1
2697 Female, age 85, both hemispheres 148.7
2327 Male, age 80, both hemispheres 134.8
2795 Female, age 91, both hemispheres 122.1
2365 Male, age 74, right hemisphere 117.8
2126 Male, age 61, both hemispheres 106.5
2062 Male, age 76, both hemispheres 96.9
Motor trigeminal nucleus
nTPM: 126.6
2321 Female, age 91, both hemispheres 138.2
2335 Male, age 61, both hemispheres 128.1
2560 Male, age 74, both hemispheres 124.6
2309 Male, age 76, both hemispheres 121.5
2079 Male, age 80, both hemispheres 120.7
Nuclei of the trapezoid body
nTPM: 113.7
2166 Male, age 80, both hemispheres 123.8
2368 Female, age 91, both hemispheres 123.1
2159 Male, age 61, both hemispheres 115.4
2735 Female, age 85, both hemispheres 108.8
1983 Male, age 76, both hemispheres 97.1
Paramedian reticular nucleus
nTPM: 112.5
2313 Male, age 61, both hemispheres 115.7
2052 Male, age 76, both hemispheres 114.5
2050 Female, age 85, both hemispheres 112.2
2057 Male, age 80, both hemispheres 107.4
Pontine nuclei
nTPM: 114.5
2115 Male, age 80, left hemisphere 126.9
2319 Female, age 91, both hemispheres 123.7
2787 Female, age 85, both hemispheres 119.5
2454 Male, age 74, left hemisphere 117.4
1863 Male, age 55, unknown 108.3
1968 Male, age 76, left hemisphere 108.2
2109 Female, age 72, unknown 106.7
2727 Male, age 61, right hemisphere 105.1
Pontine raphe nucleus
nTPM: 116.5
2853 Male, age 76, midline 121.7
2122 Female, age 85, midline 111.3
Posteroventral cochlear nucleus
nTPM: 114.5
2135 Female, age 91, both hemispheres 122.5
2341 Male, age 80, both hemispheres 119.3
2371 Male, age 61, both hemispheres 114.3
2070 Male, age 76, both hemispheres 113.6
2752 Female, age 85, both hemispheres 102.6
Principal sensory trigeminal nucleus
nTPM: 125.5
2367 Female, age 91, left hemisphere 136.1
2324 Male, age 76, both hemispheres 132.8
2158 Male, age 61, both hemispheres 121.1
2008 Male, age 80, left hemisphere 112.2
Reticular pontine nucleus, caudal
nTPM: 121.0
2332 Male, age 80, right hemisphere 133.4
2457 Female, age 91, both hemispheres 120.9
2559 Male, age 74, both hemispheres 120.5
2092 Male, age 76, both hemispheres 109.4
Reticular pontine nucleus, oral
nTPM: 117.7
2366 Female, age 91, both hemispheres 144.6
2167 Male, age 76, both hemispheres 124.8
2012 Female, age 85, both hemispheres 109.0
1939 Male, age 80, both hemispheres 108.5
2361 Male, age 74, both hemispheres 101.8
Reticulotegmental nucleus
nTPM: 127.5
2452 Male, age 74, both hemispheres 131.2
2325 Male, age 76, both hemispheres 130.6
2333 Male, age 80, both hemispheres 125.2
2322 Female, age 91, both hemispheres 123.1
Spinal trigeminal nucleus, oral
nTPM: 118.2
2164 Male, age 80, both hemispheres 129.0
1978 Male, age 76, both hemispheres 118.0
2737 Female, age 85, both hemispheres 107.5
Subcoeruleus area
nTPM: 116.1
2323 Female, age 91, left hemisphere 120.8
2089 Male, age 76, left hemisphere 119.5
2451 Male, age 74, both hemispheres 118.0
1958 Male, age 80, both hemispheres 111.7
2369 Female, age 85, left hemisphere 110.5
Superior olive
nTPM: 120.1
2561 Female, age 91, both hemispheres 142.1
2329 Male, age 80, right hemisphere 137.8
2364 Male, age 74, right hemisphere 108.9
1875 Female, age 85, both hemispheres 108.1
2020 Male, age 76, both hemispheres 103.9
Superior vestibular nucleus
nTPM: 107.0
2061 Male, age 76, both hemispheres 116.6
2383 Male, age 74, both hemispheres 102.8
2015 Male, age 80, both hemispheres 101.7
Ventral periolivary nuclei
nTPM: 118.4
2794 Female, age 91, left hemisphere 130.5
2130 Female, age 85, both hemispheres 118.6
2165 Male, age 80, both hemispheres 118.6
2023 Male, age 76, both hemispheres 106.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 122.1
2840 Female, age 85, both hemispheres 132.6
2456 Female, age 91, both hemispheres 127.5
2161 Male, age 80, both hemispheres 121.5
2449 Male, age 74, both hemispheres 121.0
2359 Male, age 61, both hemispheres 117.9
1959 Male, age 76, both hemispheres 112.3

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