HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:21.7 nTPM
FANTOM5:16.9 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:35.0 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048894
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2621 Female, age 67, right hemisphere 15.6
1898 Male, age 80, left hemisphere 14.7
2529 Female, age 94, left hemisphere 13.7
2148 Female, age 91, left hemisphere 12.3
1911 Female, age 85, right hemisphere 11.5
1855 Male, age 76, left hemisphere 11.4
Dentate gyrus
nTPM: 13.4
2530 Female, age 94, left hemisphere 19.7
2531 Female, age 67, both hemispheres 14.2
1927 Female, age 91, both hemispheres 13.4
2010 Male, age 76, both hemispheres 13.3
2528 Male, age 74, both hemispheres 10.3
2246 Female, age 85, both hemispheres 9.3
Entorhinal gyrus
nTPM: 14.3
2764 Male, age 80, right hemisphere 17.8
2613 Female, age 94, left hemisphere 17.2
2117 Female, age 91, right hemisphere 14.3
1938 Female, age 85, left hemisphere 13.0
1787 Male, age 76, left hemisphere 12.9
2686 Male, age 75, right hemisphere 10.7
Hippocampus, CA1
nTPM: 12.3
2749 Male, age 80, left hemisphere 19.8
1873 Female, age 85, both hemispheres 12.8
2045 Male, age 76, both hemispheres 11.4
2527 Male, age 74, both hemispheres 10.5
2082 Female, age 91, right hemisphere 6.8
Hippocampus, CA2
nTPM: 11.8
1963 Male, age 80, left hemisphere 16.1
1892 Male, age 76, both hemispheres 14.3
2437 Female, age 94, left hemisphere 13.2
2249 Male, age 74, both hemispheres 10.1
1940 Female, age 85, left hemisphere 9.9
2113 Female, age 91, right hemisphere 7.4
Hippocampus, CA3
nTPM: 12.8
2620 Female, age 94, left hemisphere 17.5
2861 Female, age 67, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.1
1867 Male, age 76, both hemispheres 13.1
1891 Female, age 85, both hemispheres 10.1
2436 Male, age 74, both hemispheres 6.9
Parahippocampal cortex
nTPM: 10.7
2245 Female, age 91, both hemispheres 12.3
1990 Female, age 91, right hemisphere 12.1
1933 Female, age 85, both hemispheres 12.0
2622 Female, age 67, right hemisphere 11.6
2532 Female, age 72, left hemisphere 11.5
1850 Male, age 80, both hemispheres 11.1
2018 Male, age 76, both hemispheres 9.9
2692 Male, age 74, both hemispheres 9.8
2693 Female, age 94, both hemispheres 8.9
2250 Female, age 67, right hemisphere 8.2
Perirhinal gyrus
nTPM: 11.2
1794 Male, age 80, right hemisphere 13.2
1847 Female, age 91, left hemisphere 11.9
2521 Female, age 94, right hemisphere 10.6
2848 Male, age 76, right hemisphere 10.4
1841 Female, age 85, right hemisphere 10.0
Subiculum
nTPM: 12.4
1901 Male, age 80, both hemispheres 14.9
2042 Male, age 76, both hemispheres 13.3
1977 Female, age 85, both hemispheres 12.8
2619 Male, age 74, both hemispheres 11.6
2438 Female, age 94, left hemisphere 11.2
2729 Female, age 91, right hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 40.7
Min nTPM: 7.1
Std nTPM: 5.7
Median nTPM: 21.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 40.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 40.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 38.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 36.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 32.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.9
FF:10169-103B7 60 years, female 17.7
FF:10153-102I9 76 years, female 16.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 41.5
Min nTPM: 19.2
Sample A Female 41.5
Sample B Female 28.0
Sample C Male 26.9
Sample D Male 19.2
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 21.8
Min nTPM: 19.7
Sample A Female 21.8
Sample B Female 20.6
Sample C Male 19.7
Sample D Male 20.0
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.5
Sample A Female 26.7
Sample B Female 18.8
Sample C Male 19.1
Sample D Male 16.5
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 31.3
Min nTPM: 15.9
Sample A Female 27.0
Sample B Female 15.9
Sample C Male 31.3
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 26.4
Sample A Male 30.2
Sample B Male 26.6
Sample C Female 26.4
Sample D Female 33.4
Hippocampal formation
nTPM: 35.0
Samples: 4

Max nTPM: 41.7
Min nTPM: 28.7
Sample A Male 28.7
Sample B Male 37.2
Sample C Female 41.7
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
68151349 Antisense, RP_041116_01_A07, Mouse strain C57BL/6J (56 days, male) 6.7

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