AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.2 nTPM
HPA:35.2 nTPM
GTEx:43.8 nTPM
FANTOM5:76.1 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:36.7 nTPM
Allen mouse:0.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 35.2
Sample id Sample description nTPM
Amygdala
nTPM: 35.2
2514 Male, age 75, right hemisphere 41.5
1987 Female, age 91, left hemisphere 39.0
2517 Female, age 94, left hemisphere 34.5
2814 Male, age 76, right hemisphere 33.7
2695 Female, age 67, right hemisphere 27.2
Basal amygdala
nTPM: 31.8
2609 Male, age 75, right hemisphere 40.8
2243 Female, age 91, right hemisphere 34.4
2110 Male, age 80, left hemisphere 33.6
1955 Male, age 76, both hemispheres 32.7
2685 Female, age 94, left hemisphere 29.1
2827 Female, age 67, right hemisphere 20.0
Central amygdala
nTPM: 31.7
2701 Female, age 91, right hemisphere 34.4
1905 Male, age 76, both hemispheres 33.3
2515 Male, age 75, right hemisphere 32.7
2239 Male, age 80, left hemisphere 31.6
2826 Female, age 94, left hemisphere 26.4
Corticomedial amygdala
nTPM: 35.0
2428 Male, age 75, right hemisphere 40.0
2242 Female, age 91, right hemisphere 39.8
2829 Male, age 80, left hemisphere 39.8
2240 Male, age 76, both hemispheres 36.6
2429 Female, age 94, left hemisphere 31.5
2535 Female, age 67, right hemisphere 22.3
Lateral amygdala
nTPM: 28.9
2516 Male, age 75, right hemisphere 35.2
2256 Male, age 80, left hemisphere 32.2
2255 Female, age 91, right hemisphere 30.7
1883 Male, age 76, both hemispheres 29.8
2534 Female, age 94, left hemisphere 26.7
2830 Female, age 67, right hemisphere 18.7
Stria terminalis, bed nucleus
nTPM: 30.4
2201 Male, age 74, unknown 34.0
2486 Female, age 94, both hemispheres 29.4
1974 Female, age 91, both hemispheres 27.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 43.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 43.8
Samples: 152

Max nTPM: 108.2
Min nTPM: 5.6
Std nTPM: 22.4
Median nTPM: 40.6
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 108.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 103.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 100.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 100.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 97.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 90.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 89.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 86.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 85.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 84.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 77.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 76.1
FF:10151-102I7 76 years, female 76.1

AMYGDALA - Pig RNA-seqi
Average nTPM 28.8
Pig sample Sample description nTPM
Amygdala
nTPM: 28.8
Samples: 4

Max nTPM: 39.7
Min nTPM: 21.7
Sample A Female 39.7
Sample B Female 21.7
Sample C Male 23.8
Sample D Male 30.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 36.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 36.8
Samples: 4

Max nTPM: 39.7
Min nTPM: 33.1
Sample A Male 39.7
Sample B Male 35.2
Sample C Female 33.1
Sample D Female 39.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.6
72080155 Antisense, RP_051017_03_C11, Mouse strain C57BL/6J (56 days, male) 0.9
69012849 Antisense, RP_050309_01_F03, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.