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PCBP1
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  • PCBP1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:142.8 nTPM
FANTOM5:281.1 Scaled Tags Per Million
Pig:67.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB037113
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 142.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 142.8
Samples: 246

Max nTPM: 354.0
Min nTPM: 95.7
Std nTPM: 27.0
Median nTPM: 137.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 354.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 242.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 233.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 228.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 220.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 215.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 214.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 212.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 208.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 206.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 202.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 201.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 201.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 190.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 182.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 178.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 178.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 176.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 175.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 175.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 174.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 171.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 169.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 169.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 167.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 167.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 167.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 165.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 165.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 164.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 163.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 162.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 161.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 161.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 161.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 161.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 161.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 160.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 159.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 159.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 158.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 157.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 157.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 157.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 157.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 156.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 156.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 156.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 155.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 154.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 154.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 153.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 152.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 152.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 152.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 151.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 151.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 151.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 149.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 149.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 149.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 149.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 149.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 149.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 148.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 148.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 148.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 148.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 148.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 147.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 147.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 147.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 146.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 146.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 145.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 145.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 145.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 145.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 145.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 145.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 144.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 144.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 144.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 143.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 143.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 143.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 142.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 141.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 141.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 141.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 141.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 141.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 141.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 140.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 140.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 140.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 140.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 140.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 140.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 140.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 139.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 139.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 139.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 139.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 138.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 138.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 138.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 138.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 138.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 137.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 137.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 137.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 137.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 137.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 137.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 136.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 136.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 136.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 136.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 136.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 136.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 136.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 135.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 135.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 135.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 135.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 135.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 134.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 134.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 134.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 134.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 133.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 133.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 133.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 132.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 132.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 132.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 132.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 132.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 132.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 132.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 132.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 131.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 131.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 131.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 131.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 131.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 131.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 130.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 130.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 130.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 130.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 130.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 129.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 129.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 128.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 128.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 128.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 128.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 128.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 127.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 127.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 126.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 126.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 126.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 126.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 125.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 125.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 125.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 125.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 125.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 125.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 125.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 125.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 124.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 124.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 124.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 124.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 124.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 124.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 124.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 124.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 123.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 123.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 123.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 123.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 122.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 122.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 122.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 122.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 121.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 121.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 120.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 120.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 120.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 120.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 120.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 120.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 119.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 119.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 119.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 119.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 119.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 118.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 118.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 118.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 116.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 115.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 114.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 111.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 108.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 105.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 102.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 102.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 100.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 95.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 281.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 281.1
FF:10164-103B2 76 years, female 281.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 67.8
Pig sample Sample description nTPM
Caudate
nTPM: 67.8
Samples: 4

Max nTPM: 77.7
Min nTPM: 61.4
Sample A Female 64.3
Sample B Female 67.7
Sample C Male 77.7
Sample D Male 61.4

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