HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:87.9 nTPM
HPA:87.9 nTPM
GTEx:90.6 nTPM
FANTOM5:84.3 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:100.3 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034696Antibody HPA034697Antibody HPA064836
Glial cells Not detectedLowNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.9
Sample id Sample description nTPM
Hippocampus
nTPM: 79.1
1898 Male, age 80, left hemisphere 89.6
2529 Female, age 94, left hemisphere 84.4
2621 Female, age 67, right hemisphere 78.6
2148 Female, age 91, left hemisphere 75.7
1855 Male, age 76, left hemisphere 74.4
1911 Female, age 85, right hemisphere 71.9
Dentate gyrus
nTPM: 74.6
1927 Female, age 91, both hemispheres 86.3
2528 Male, age 74, both hemispheres 76.9
2010 Male, age 76, both hemispheres 76.7
2530 Female, age 94, left hemisphere 73.4
2246 Female, age 85, both hemispheres 70.2
2531 Female, age 67, both hemispheres 64.3
Entorhinal gyrus
nTPM: 77.5
1938 Female, age 85, left hemisphere 82.9
2686 Male, age 75, right hemisphere 82.1
2764 Male, age 80, right hemisphere 78.7
2117 Female, age 91, right hemisphere 75.9
2613 Female, age 94, left hemisphere 73.2
1787 Male, age 76, left hemisphere 72.4
Hippocampus, CA1
nTPM: 84.7
2749 Male, age 80, left hemisphere 113.4
2527 Male, age 74, both hemispheres 89.7
1873 Female, age 85, both hemispheres 77.5
2082 Female, age 91, right hemisphere 74.2
2045 Male, age 76, both hemispheres 68.6
Hippocampus, CA2
nTPM: 83.9
1892 Male, age 76, both hemispheres 91.7
1963 Male, age 80, left hemisphere 89.1
2249 Male, age 74, both hemispheres 87.1
1940 Female, age 85, left hemisphere 80.3
2113 Female, age 91, right hemisphere 78.9
2437 Female, age 94, left hemisphere 76.5
Hippocampus, CA3
nTPM: 80.6
2137 Male, age 80, left hemisphere 106.0
2436 Male, age 74, both hemispheres 87.1
1867 Male, age 76, both hemispheres 83.9
1891 Female, age 85, both hemispheres 72.8
2861 Female, age 67, both hemispheres 67.8
2620 Female, age 94, left hemisphere 65.8
Parahippocampal cortex
nTPM: 81.2
1850 Male, age 80, both hemispheres 95.3
2245 Female, age 91, both hemispheres 84.2
2693 Female, age 94, both hemispheres 82.4
1990 Female, age 91, right hemisphere 82.1
1933 Female, age 85, both hemispheres 79.2
2532 Female, age 72, left hemisphere 78.7
2250 Female, age 67, right hemisphere 78.6
2622 Female, age 67, right hemisphere 78.4
2692 Male, age 74, both hemispheres 78.3
2018 Male, age 76, both hemispheres 74.6
Perirhinal gyrus
nTPM: 87.9
1847 Female, age 91, left hemisphere 95.0
1794 Male, age 80, right hemisphere 90.7
1841 Female, age 85, right hemisphere 90.6
2521 Female, age 94, right hemisphere 87.9
2848 Male, age 76, right hemisphere 75.1
Subiculum
nTPM: 78.7
2438 Female, age 94, left hemisphere 91.7
1901 Male, age 80, both hemispheres 84.0
2619 Male, age 74, both hemispheres 77.4
2042 Male, age 76, both hemispheres 74.5
1977 Female, age 85, both hemispheres 73.7
2729 Female, age 91, right hemisphere 71.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.6
Samples: 197

Max nTPM: 292.4
Min nTPM: 33.0
Std nTPM: 37.3
Median nTPM: 81.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 292.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 196.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 188.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 177.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 174.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 171.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 169.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 167.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 167.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 162.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 160.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.3
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 80.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 46.2
Min nTPM: 29.4
Sample A Female 44.8
Sample B Female 34.3
Sample C Male 46.2
Sample D Male 29.4
Entorhinal cortex
nTPM: 42.7
Samples: 4

Max nTPM: 56.9
Min nTPM: 35.3
Sample A Female 40.6
Sample B Female 56.9
Sample C Male 38.1
Sample D Male 35.3
Subiculum
nTPM: 35.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 29.2
Sample A Female 45.0
Sample B Female 29.2
Sample C Male 34.1
Sample D Male 31.5
Ventral hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 37.4
Min nTPM: 29.3
Sample A Female 37.4
Sample B Female 29.3
Sample C Male 30.7
Sample D Male 36.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.7
Samples: 4

Max nTPM: 103.5
Min nTPM: 88.2
Sample A Male 103.5
Sample B Male 98.9
Sample C Female 92.1
Sample D Female 88.2
Hippocampal formation
nTPM: 100.4
Samples: 4

Max nTPM: 116.0
Min nTPM: 90.3
Sample A Male 116.0
Sample B Male 99.7
Sample C Female 90.3
Sample D Female 95.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
2705 Antisense, RP_040604_02_A10, Mouse strain C57BL/6J (56 days, male) 17.0
2706 Antisense, RP_040604_02_A10, Mouse strain C57BL/6J (56 days, male) 12.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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