HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:84.6 nTPM
HPA:84.6 nTPM
GTEx:72.3 nTPM
FANTOM5:214.6 Scaled Tags Per Million
Pig:156.4 nTPM
Mouse:74.5 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015077Antibody CAB037339
Glial cells LowNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.6
Sample id Sample description nTPM
Hippocampus
nTPM: 84.6
2148 Female, age 91, left hemisphere 118.4
2621 Female, age 67, right hemisphere 84.4
2529 Female, age 94, left hemisphere 82.0
1898 Male, age 80, left hemisphere 76.8
1911 Female, age 85, right hemisphere 74.5
1855 Male, age 76, left hemisphere 71.7
Dentate gyrus
nTPM: 64.0
2530 Female, age 94, left hemisphere 69.4
2528 Male, age 74, both hemispheres 66.8
2246 Female, age 85, both hemispheres 65.9
1927 Female, age 91, both hemispheres 65.5
2531 Female, age 67, both hemispheres 61.5
2010 Male, age 76, both hemispheres 54.8
Entorhinal gyrus
nTPM: 74.8
2117 Female, age 91, right hemisphere 87.9
2613 Female, age 94, left hemisphere 85.4
2764 Male, age 80, right hemisphere 77.3
1787 Male, age 76, left hemisphere 67.5
1938 Female, age 85, left hemisphere 67.3
2686 Male, age 75, right hemisphere 63.2
Hippocampus, CA1
nTPM: 61.1
1873 Female, age 85, both hemispheres 75.3
2527 Male, age 74, both hemispheres 72.6
2749 Male, age 80, left hemisphere 61.3
2082 Female, age 91, right hemisphere 50.3
2045 Male, age 76, both hemispheres 46.0
Hippocampus, CA2
nTPM: 66.9
1940 Female, age 85, left hemisphere 75.4
1963 Male, age 80, left hemisphere 70.4
2249 Male, age 74, both hemispheres 68.1
1892 Male, age 76, both hemispheres 63.9
2113 Female, age 91, right hemisphere 62.3
2437 Female, age 94, left hemisphere 61.6
Hippocampus, CA3
nTPM: 64.4
2861 Female, age 67, both hemispheres 81.7
2620 Female, age 94, left hemisphere 75.4
1891 Female, age 85, both hemispheres 69.8
2137 Male, age 80, left hemisphere 56.0
1867 Male, age 76, both hemispheres 55.5
2436 Male, age 74, both hemispheres 47.7
Parahippocampal cortex
nTPM: 70.2
2622 Female, age 67, right hemisphere 94.2
2245 Female, age 91, both hemispheres 75.5
2532 Female, age 72, left hemisphere 74.0
1990 Female, age 91, right hemisphere 73.7
2692 Male, age 74, both hemispheres 72.5
1933 Female, age 85, both hemispheres 68.6
2250 Female, age 67, right hemisphere 65.4
1850 Male, age 80, both hemispheres 64.6
2693 Female, age 94, both hemispheres 57.5
2018 Male, age 76, both hemispheres 56.3
Perirhinal gyrus
nTPM: 65.8
1847 Female, age 91, left hemisphere 69.8
1794 Male, age 80, right hemisphere 69.6
2521 Female, age 94, right hemisphere 65.7
1841 Female, age 85, right hemisphere 63.7
2848 Male, age 76, right hemisphere 60.2
Subiculum
nTPM: 73.0
2729 Female, age 91, right hemisphere 91.0
2619 Male, age 74, both hemispheres 83.5
1901 Male, age 80, both hemispheres 69.4
2438 Female, age 94, left hemisphere 69.4
1977 Female, age 85, both hemispheres 68.2
2042 Male, age 76, both hemispheres 56.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.3
Samples: 197

Max nTPM: 185.1
Min nTPM: 14.9
Std nTPM: 23.0
Median nTPM: 68.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 185.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 142.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 132.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 130.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 128.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 123.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 118.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 116.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 116.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 115.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 111.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 214.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 214.6
FF:10153-102I9 76 years, female 256.6
FF:10169-103B7 60 years, female 172.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 156.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 111.3
Samples: 4

Max nTPM: 130.4
Min nTPM: 96.9
Sample A Female 113.4
Sample B Female 104.5
Sample C Male 130.4
Sample D Male 96.9
Entorhinal cortex
nTPM: 156.4
Samples: 4

Max nTPM: 173.7
Min nTPM: 146.2
Sample A Female 155.2
Sample B Female 146.2
Sample C Male 173.7
Sample D Male 150.6
Subiculum
nTPM: 131.3
Samples: 4

Max nTPM: 156.0
Min nTPM: 118.0
Sample A Female 156.0
Sample B Female 120.9
Sample C Male 130.1
Sample D Male 118.0
Ventral hippocampus
nTPM: 104.9
Samples: 4

Max nTPM: 137.1
Min nTPM: 75.3
Sample A Female 75.3
Sample B Female 95.4
Sample C Male 111.9
Sample D Male 137.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 83.0
Min nTPM: 69.1
Sample A Male 74.1
Sample B Male 71.9
Sample C Female 69.1
Sample D Female 83.0
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 61.1
Min nTPM: 44.3
Sample A Male 61.1
Sample B Male 57.5
Sample C Female 44.3
Sample D Female 51.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69540411 Antisense, RP_050426_01_G02, Mouse strain C57BL/6J (56 days, male) 3.5

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