HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:10.0 nTPM
HPA:10.0 nTPM
GTEx:29.4 nTPM
FANTOM5:98.6 Scaled Tags Per Million
Pig:27.6 nTPM
Mouse:52.6 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.0
Sample id Sample description nTPM
Hippocampus
nTPM: 7.0
2621 Female, age 67, right hemisphere 22.8
2148 Female, age 91, left hemisphere 8.2
2529 Female, age 94, left hemisphere 7.0
1911 Female, age 85, right hemisphere 4.2
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
Dentate gyrus
nTPM: 7.6
2531 Female, age 67, both hemispheres 25.6
2530 Female, age 94, left hemisphere 12.4
2246 Female, age 85, both hemispheres 4.7
2528 Male, age 74, both hemispheres 1.4
1927 Female, age 91, both hemispheres 1.3
2010 Male, age 76, both hemispheres 0.0
Entorhinal gyrus
nTPM: 3.9
2613 Female, age 94, left hemisphere 12.4
2764 Male, age 80, right hemisphere 5.8
2117 Female, age 91, right hemisphere 5.2
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 1.9
2749 Male, age 80, left hemisphere 5.2
2527 Male, age 74, both hemispheres 4.6
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 2.3
1963 Male, age 80, left hemisphere 11.2
2437 Female, age 94, left hemisphere 2.7
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 10.0
2620 Female, age 94, left hemisphere 29.8
2861 Female, age 67, both hemispheres 23.8
2137 Male, age 80, left hemisphere 6.7
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.1
2622 Female, age 67, right hemisphere 12.7
2532 Female, age 72, left hemisphere 11.2
2245 Female, age 91, both hemispheres 7.2
2692 Male, age 74, both hemispheres 0.7
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.0
1794 Male, age 80, right hemisphere 0.0
1841 Female, age 85, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 1.3
2042 Male, age 76, both hemispheres 2.7
2619 Male, age 74, both hemispheres 2.5
2438 Female, age 94, left hemisphere 1.7
1901 Male, age 80, both hemispheres 1.1
1977 Female, age 85, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.4
Samples: 197

Max nTPM: 63.1
Min nTPM: 8.8
Std nTPM: 8.6
Median nTPM: 28.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 63.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 62.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 58.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 55.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 52.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 49.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 48.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 47.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 47.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 46.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 46.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.6
FF:10153-102I9 76 years, female 113.5
FF:10169-103B7 60 years, female 83.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 32.3
Min nTPM: 23.6
Sample A Female 32.3
Sample B Female 28.7
Sample C Male 23.6
Sample D Male 25.7
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 29.0
Min nTPM: 20.4
Sample A Female 24.2
Sample B Female 24.1
Sample C Male 29.0
Sample D Male 20.4
Subiculum
nTPM: 20.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 18.8
Sample A Female 25.5
Sample B Female 19.8
Sample C Male 19.5
Sample D Male 18.8
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 28.2
Min nTPM: 17.5
Sample A Female 19.9
Sample B Female 17.5
Sample C Male 23.3
Sample D Male 28.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 51.4
Min nTPM: 38.4
Sample A Male 42.4
Sample B Male 38.4
Sample C Female 42.1
Sample D Female 51.4
Hippocampal formation
nTPM: 52.6
Samples: 4

Max nTPM: 68.5
Min nTPM: 43.0
Sample A Male 43.0
Sample B Male 55.1
Sample C Female 68.5
Sample D Female 43.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
74581020 Antisense, RP_060215_02_D06, Mouse strain C57BL/6J (56 days, male) 2.3
70725567 Antisense, RP_050705_04_C11, Mouse strain C57BL/6J (56 days, male) 0.0

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