HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.4 nTPM
HPA:32.4 nTPM
GTEx:37.3 nTPM
FANTOM5:129.7 Scaled Tags Per Million
Pig:47.0 nTPM
Mouse:79.9 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010926Antibody CAB002148
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.4
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
1911 Female, age 85, right hemisphere 29.4
1898 Male, age 80, left hemisphere 28.4
2529 Female, age 94, left hemisphere 26.7
2621 Female, age 67, right hemisphere 25.9
1855 Male, age 76, left hemisphere 22.6
2148 Female, age 91, left hemisphere 21.3
Dentate gyrus
nTPM: 24.3
2530 Female, age 94, left hemisphere 29.6
2528 Male, age 74, both hemispheres 26.9
2246 Female, age 85, both hemispheres 24.3
2010 Male, age 76, both hemispheres 22.8
1927 Female, age 91, both hemispheres 22.5
2531 Female, age 67, both hemispheres 19.9
Entorhinal gyrus
nTPM: 32.0
1938 Female, age 85, left hemisphere 35.9
2117 Female, age 91, right hemisphere 35.8
2613 Female, age 94, left hemisphere 35.7
1787 Male, age 76, left hemisphere 32.6
2764 Male, age 80, right hemisphere 29.4
2686 Male, age 75, right hemisphere 22.4
Hippocampus, CA1
nTPM: 23.2
2527 Male, age 74, both hemispheres 28.3
1873 Female, age 85, both hemispheres 23.1
2082 Female, age 91, right hemisphere 23.1
2045 Male, age 76, both hemispheres 22.1
2749 Male, age 80, left hemisphere 19.4
Hippocampus, CA2
nTPM: 28.0
1940 Female, age 85, left hemisphere 32.3
2249 Male, age 74, both hemispheres 32.2
2437 Female, age 94, left hemisphere 28.1
1963 Male, age 80, left hemisphere 25.5
1892 Male, age 76, both hemispheres 24.8
2113 Female, age 91, right hemisphere 24.8
Hippocampus, CA3
nTPM: 23.0
1891 Female, age 85, both hemispheres 35.2
1867 Male, age 76, both hemispheres 28.8
2436 Male, age 74, both hemispheres 25.2
2137 Male, age 80, left hemisphere 18.1
2620 Female, age 94, left hemisphere 16.3
2861 Female, age 67, both hemispheres 14.6
Parahippocampal cortex
nTPM: 27.5
1990 Female, age 91, right hemisphere 33.6
2692 Male, age 74, both hemispheres 30.8
2250 Female, age 67, right hemisphere 30.1
1933 Female, age 85, both hemispheres 29.8
1850 Male, age 80, both hemispheres 29.2
2532 Female, age 72, left hemisphere 27.1
2018 Male, age 76, both hemispheres 26.2
2693 Female, age 94, both hemispheres 25.7
2245 Female, age 91, both hemispheres 24.2
2622 Female, age 67, right hemisphere 18.6
Perirhinal gyrus
nTPM: 27.6
1847 Female, age 91, left hemisphere 29.5
2848 Male, age 76, right hemisphere 28.6
2521 Female, age 94, right hemisphere 28.2
1794 Male, age 80, right hemisphere 26.4
1841 Female, age 85, right hemisphere 25.2
Subiculum
nTPM: 32.4
1901 Male, age 80, both hemispheres 36.1
1977 Female, age 85, both hemispheres 35.4
2042 Male, age 76, both hemispheres 35.4
2438 Female, age 94, left hemisphere 34.7
2619 Male, age 74, both hemispheres 28.4
2729 Female, age 91, right hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.3
Samples: 197

Max nTPM: 90.9
Min nTPM: 14.4
Std nTPM: 14.3
Median nTPM: 33.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 90.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 84.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 78.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 74.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 73.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 70.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 70.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 69.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 69.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 68.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 67.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.7
FF:10153-102I9 76 years, female 168.4
FF:10169-103B7 60 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 40.4
Min nTPM: 21.8
Sample A Female 40.4
Sample B Female 33.1
Sample C Male 34.9
Sample D Male 21.8
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 31.0
Sample A Female 49.6
Sample B Female 42.6
Sample C Male 31.0
Sample D Male 33.3
Subiculum
nTPM: 47.1
Samples: 4

Max nTPM: 54.1
Min nTPM: 38.5
Sample A Female 52.7
Sample B Female 42.9
Sample C Male 38.5
Sample D Male 54.1
Ventral hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 50.6
Min nTPM: 28.6
Sample A Female 34.7
Sample B Female 31.1
Sample C Male 28.6
Sample D Male 50.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.9
Samples: 4

Max nTPM: 99.3
Min nTPM: 67.6
Sample A Male 67.6
Sample B Male 78.3
Sample C Female 74.3
Sample D Female 99.3
Hippocampal formation
nTPM: 47.1
Samples: 4

Max nTPM: 53.3
Min nTPM: 39.7
Sample A Male 50.4
Sample B Male 53.3
Sample C Female 39.7
Sample D Female 44.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
130155 Antisense, RP_040407_01_F11, Mouse strain C57BL/6J (56 days, male) 11.6
70928271 Antisense, RP_050725_02_C06, Mouse strain C57BL/6J (56 days, male) 7.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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