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NSG2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:328.6 nTPM
FANTOM5:862.8 Scaled Tags Per Million
Pig:353.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA056191
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 328.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 328.6
Samples: 246

Max nTPM: 922.4
Min nTPM: 23.8
Std nTPM: 184.1
Median nTPM: 320.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 922.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 780.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 760.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 754.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 727.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 723.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 691.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 673.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 671.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 665.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 650.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 645.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 643.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 642.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 639.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 626.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 611.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 600.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 593.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 592.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 590.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 588.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 585.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 584.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 582.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 579.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 576.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 569.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 563.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 561.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 561.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 551.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 550.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 549.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 543.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 541.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 537.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 536.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 534.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 531.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 529.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 529.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 525.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 525.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 514.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 511.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 499.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 497.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 492.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 491.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 489.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 488.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 486.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 478.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 468.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 468.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 465.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 465.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 460.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 460.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 454.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 451.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 446.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 445.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 443.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 442.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 440.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 430.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 425.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 425.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 423.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 421.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 418.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 417.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 413.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 412.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 411.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 410.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 408.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 408.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 407.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 406.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 405.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 405.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 404.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 401.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 400.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 400.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 398.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 391.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 390.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 390.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 386.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 383.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 383.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 381.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 379.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 377.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 377.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 374.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 367.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 365.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 363.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 361.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 360.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 360.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 358.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 357.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 357.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 355.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 352.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 347.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 346.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 344.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 343.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 342.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 334.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 334.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 333.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 329.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 327.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 325.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 321.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 318.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 318.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 314.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 314.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 313.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 312.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 308.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 305.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 303.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 302.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 300.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 300.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 298.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 295.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 291.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 288.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 286.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 285.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 283.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 282.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 282.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 281.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 281.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 278.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 277.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 276.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 272.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 270.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 268.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 268.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 268.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 266.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 263.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 261.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 259.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 256.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 254.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 254.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 245.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 244.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 239.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 239.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 237.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 230.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 223.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 223.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 216.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 209.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 207.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 202.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 201.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 197.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 195.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 194.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 194.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 188.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 187.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 180.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 177.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 176.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 174.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 170.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 165.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 164.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 159.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 158.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 158.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 155.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 154.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 154.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 153.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 149.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 140.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 139.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 138.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 135.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 132.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 129.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 127.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 126.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 120.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 112.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 104.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 104.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 103.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 101.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 99.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 93.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 92.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 80.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 79.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 77.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 74.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 65.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 63.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 54.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 52.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 50.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 47.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 40.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 31.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 30.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 29.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 23.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 862.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 862.8
FF:10164-103B2 76 years, female 862.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 353.1
Pig sample Sample description nTPM
Caudate
nTPM: 353.2
Samples: 4

Max nTPM: 422.6
Min nTPM: 310.7
Sample A Female 310.7
Sample B Female 362.6
Sample C Male 422.6
Sample D Male 316.7

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