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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1505.1 nTPM
FANTOM5:440.2 Scaled Tags Per Million
Pig:1233.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041344Antibody HPA049132Antibody CAB013048
Glial cells Not detectedHighMedium
Neuronal cells LowMediumNot detected






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1505.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1505.1
Samples: 246

Max nTPM: 4069.3
Min nTPM: 937.5
Std nTPM: 369.3
Median nTPM: 1433.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4069.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3517.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2921.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2715.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2682.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2620.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2594.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2470.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 2428.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2395.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2250.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2077.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2075.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 2060.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2008.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1995.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1975.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1969.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1950.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1948.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1942.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1909.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1884.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1867.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1847.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1844.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1840.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1838.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1817.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1769.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1768.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1756.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1752.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1750.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1723.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1717.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1716.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1714.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1709.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1702.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1698.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1697.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1673.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1671.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1670.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1670.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1665.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1662.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1657.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1655.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1653.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1652.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1652.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1650.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1649.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1646.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1646.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1641.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1638.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1622.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1621.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1607.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1588.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1587.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1582.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1580.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1577.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1575.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1572.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1571.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1563.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1562.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1561.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1559.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1559.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1550.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1548.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1548.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1543.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1540.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1538.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1538.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1536.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1536.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1535.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1528.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1527.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1526.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1516.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1516.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1515.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1511.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1510.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1508.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1506.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1506.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1505.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1503.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1498.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1498.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1495.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1491.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1486.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1484.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1483.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1483.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1481.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1478.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1474.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1470.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1464.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1462.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1461.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1457.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1455.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1453.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1450.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1445.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1440.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1440.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1439.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1438.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1437.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1428.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1427.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1419.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1419.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1415.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1413.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1412.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1406.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1404.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1403.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1401.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1400.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1393.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1391.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1390.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1390.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1388.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1382.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1382.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1381.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1381.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1380.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1379.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1373.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1373.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1370.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1369.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1366.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1364.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1361.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1361.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1359.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1357.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1356.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1355.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1355.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1352.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1351.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1349.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1348.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1340.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1339.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1338.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1336.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1336.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1336.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1335.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1327.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1325.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1325.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1324.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1320.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1317.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1317.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1311.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1304.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1298.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1298.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1297.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1297.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1297.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1294.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1293.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1291.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1290.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1288.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1287.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1286.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1285.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1285.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1278.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1278.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1273.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1273.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1272.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1270.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1259.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1255.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1248.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1246.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1242.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1241.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1239.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1238.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1237.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1235.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1233.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1231.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1226.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1224.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1215.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1215.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1215.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1213.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1209.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1207.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1207.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1199.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1199.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1189.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1187.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1183.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1183.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1181.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1175.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1169.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1164.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1143.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1136.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1123.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1121.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1094.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1087.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1083.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1073.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1068.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1052.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1049.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1042.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1031.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1019.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 989.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 937.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 440.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 440.2
FF:10164-103B2 76 years, female 440.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1233.8
Pig sample Sample description nTPM
Caudate
nTPM: 1233.8
Samples: 4

Max nTPM: 1375.0
Min nTPM: 1049.9
Sample A Female 1139.5
Sample B Female 1375.0
Sample C Male 1370.7
Sample D Male 1049.9

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