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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:140.8 nTPM
FANTOM5:134.1 Scaled Tags Per Million
Pig:17.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018531
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 140.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 140.8
Samples: 246

Max nTPM: 1118.8
Min nTPM: 3.3
Std nTPM: 167.5
Median nTPM: 81.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1118.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 931.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 921.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 828.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 823.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 683.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 632.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 577.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 571.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 499.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 455.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 451.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 437.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 435.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 435.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 430.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 406.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 396.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 394.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 386.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 379.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 362.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 327.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 321.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 316.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 307.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 306.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 304.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 286.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 280.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 279.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 278.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 272.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 270.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 260.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 256.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 253.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 248.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 241.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 236.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 235.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 235.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 233.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 232.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 230.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 225.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 225.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 217.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 211.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 210.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 209.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 209.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 201.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 199.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 199.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 197.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 197.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 194.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 192.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 192.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 191.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 190.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 189.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 182.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 181.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 179.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 176.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 173.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 173.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 159.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 157.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 156.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 155.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 153.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 153.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 147.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 145.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 138.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 134.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 131.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 131.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 125.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 124.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 122.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 120.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 119.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 117.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 116.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 114.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 113.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 113.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 107.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 107.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 106.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 105.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 105.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 104.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 104.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 100.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 97.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 96.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 95.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 94.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 93.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 92.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 91.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 91.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 87.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 87.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 85.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 84.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 83.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 83.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 82.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 78.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 77.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 75.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 74.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 74.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 73.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 71.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 71.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 68.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 67.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 66.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 66.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 63.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 63.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 61.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 60.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 59.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 59.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 56.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 54.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 52.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 52.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 49.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 48.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 43.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 41.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 37.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 36.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 35.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 33.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 31.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 30.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 30.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 30.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 29.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 29.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 29.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 29.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 28.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 26.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 25.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 25.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 25.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 24.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 24.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 24.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 23.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 22.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 21.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 21.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 21.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 21.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 20.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 20.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 19.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 19.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 18.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 18.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 18.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 17.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 17.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 16.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 16.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 15.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 7.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 3.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 134.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 134.1
FF:10164-103B2 76 years, female 134.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 17.0
Pig sample Sample description nTPM
Caudate
nTPM: 17.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 10.4
Sample A Female 14.7
Sample B Female 10.4
Sample C Male 21.8
Sample D Male 21.0

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