HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi 		41.240
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.0 nTPM
HPA:59.0 nTPM
GTEx:38.1 nTPM
FANTOM5:143.0 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:48.9 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015770
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA015770
Hippocampal formation mean intensity 41.240
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 6.703
Molecular layer of the dentate gyrus 7.661
Granular dentate gyrus 18.766
CA1 - oriens layer 1.524
CA1 - pyramidal layer 15.452
CA1 - radiatum layer 10.314
CA2 - oriens layer 16.891
CA2 - pyramidal layer 41.240
CA2 - radiatum layer 18.795
CA3 - oriens layer 23.451
CA3 - pyramidal layer 24.661
CA3 - radiatum layer 25.194
Stratum lucidum 19.880
Lacunosum moleculare 1.463
Subiculum 12.807

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.0
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
2148 Female, age 91, left hemisphere 57.6
1898 Male, age 80, left hemisphere 57.3
1911 Female, age 85, right hemisphere 54.9
2529 Female, age 94, left hemisphere 53.7
1855 Male, age 76, left hemisphere 51.8
2621 Female, age 67, right hemisphere 46.4
Dentate gyrus
nTPM: 50.0
2528 Male, age 74, both hemispheres 65.3
1927 Female, age 91, both hemispheres 57.5
2246 Female, age 85, both hemispheres 48.2
2531 Female, age 67, both hemispheres 46.2
2010 Male, age 76, both hemispheres 44.1
2530 Female, age 94, left hemisphere 38.9
Entorhinal gyrus
nTPM: 40.4
2117 Female, age 91, right hemisphere 52.3
2686 Male, age 75, right hemisphere 40.0
1787 Male, age 76, left hemisphere 39.2
1938 Female, age 85, left hemisphere 38.4
2764 Male, age 80, right hemisphere 36.5
2613 Female, age 94, left hemisphere 35.8
Hippocampus, CA1
nTPM: 59.0
2749 Male, age 80, left hemisphere 89.0
1873 Female, age 85, both hemispheres 56.1
2527 Male, age 74, both hemispheres 55.5
2082 Female, age 91, right hemisphere 47.9
2045 Male, age 76, both hemispheres 46.6
Hippocampus, CA2
nTPM: 48.8
1963 Male, age 80, left hemisphere 62.5
2249 Male, age 74, both hemispheres 52.9
2113 Female, age 91, right hemisphere 52.2
1892 Male, age 76, both hemispheres 50.3
1940 Female, age 85, left hemisphere 39.9
2437 Female, age 94, left hemisphere 35.1
Hippocampus, CA3
nTPM: 54.7
2137 Male, age 80, left hemisphere 91.0
2620 Female, age 94, left hemisphere 60.9
2861 Female, age 67, both hemispheres 48.0
1891 Female, age 85, both hemispheres 44.7
2436 Male, age 74, both hemispheres 42.9
1867 Male, age 76, both hemispheres 40.7
Parahippocampal cortex
nTPM: 39.7
2245 Female, age 91, both hemispheres 46.7
2250 Female, age 67, right hemisphere 44.6
2018 Male, age 76, both hemispheres 44.1
2622 Female, age 67, right hemisphere 43.6
1933 Female, age 85, both hemispheres 41.5
1850 Male, age 80, both hemispheres 39.9
2692 Male, age 74, both hemispheres 36.4
1990 Female, age 91, right hemisphere 34.8
2693 Female, age 94, both hemispheres 34.6
2532 Female, age 72, left hemisphere 30.6
Perirhinal gyrus
nTPM: 41.5
1847 Female, age 91, left hemisphere 45.7
2521 Female, age 94, right hemisphere 45.6
1794 Male, age 80, right hemisphere 44.9
1841 Female, age 85, right hemisphere 38.4
2848 Male, age 76, right hemisphere 32.9
Subiculum
nTPM: 43.0
2729 Female, age 91, right hemisphere 58.3
1901 Male, age 80, both hemispheres 50.4
2619 Male, age 74, both hemispheres 42.8
2042 Male, age 76, both hemispheres 38.1
1977 Female, age 85, both hemispheres 37.0
2438 Female, age 94, left hemisphere 31.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.1
Samples: 197

Max nTPM: 73.6
Min nTPM: 7.7
Std nTPM: 13.0
Median nTPM: 37.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 73.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 68.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 65.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 65.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 65.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 63.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 62.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 62.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 60.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 58.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.0
FF:10153-102I9 76 years, female 144.8
FF:10169-103B7 60 years, female 141.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 44.7
Min nTPM: 26.5
Sample A Female 41.4
Sample B Female 44.7
Sample C Male 26.5
Sample D Male 33.3
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 23.9
Min nTPM: 17.7
Sample A Female 23.9
Sample B Female 20.7
Sample C Male 20.7
Sample D Male 17.7
Subiculum
nTPM: 21.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.9
Sample A Female 24.9
Sample B Female 19.7
Sample C Male 21.4
Sample D Male 17.9
Ventral hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 48.5
Min nTPM: 23.8
Sample A Female 28.0
Sample B Female 23.8
Sample C Male 30.0
Sample D Male 48.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 37.9
Min nTPM: 29.5
Sample A Male 33.6
Sample B Male 29.5
Sample C Female 33.8
Sample D Female 37.9
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 55.9
Min nTPM: 42.4
Sample A Male 45.3
Sample B Male 52.0
Sample C Female 55.9
Sample D Female 42.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
68862030 Antisense, RP_050301_01_D04, Mouse strain C57BL/6J (56 days, male) 8.3

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