HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		177.252
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.5 nTPM
HPA:16.5 nTPM
GTEx:15.0 nTPM
FANTOM5:60.6 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:17.3 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019674
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA019674
Hippocampal formation mean intensity 177.252
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 41.538
Molecular layer of the dentate gyrus 4.515
Granular dentate gyrus 177.252
CA1 - oriens layer 0.104
CA1 - pyramidal layer 59.187
CA1 - radiatum layer 0.627
CA2 - oriens layer 4.467
CA2 - pyramidal layer 100.721
CA2 - radiatum layer 12.040
CA3 - oriens layer 9.055
CA3 - pyramidal layer 73.940
CA3 - radiatum layer 15.026
Stratum lucidum 18.729
Lacunosum moleculare 7.898
Subiculum -

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.6
2529 Female, age 94, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.2
2148 Female, age 91, left hemisphere 9.1
2621 Female, age 67, right hemisphere 8.6
1898 Male, age 80, left hemisphere 7.5
1855 Male, age 76, left hemisphere 5.5
Dentate gyrus
nTPM: 8.9
2531 Female, age 67, both hemispheres 13.9
2246 Female, age 85, both hemispheres 13.3
1927 Female, age 91, both hemispheres 10.0
2528 Male, age 74, both hemispheres 6.6
2010 Male, age 76, both hemispheres 5.5
2530 Female, age 94, left hemisphere 4.3
Entorhinal gyrus
nTPM: 16.5
2613 Female, age 94, left hemisphere 27.8
1938 Female, age 85, left hemisphere 17.8
2686 Male, age 75, right hemisphere 17.2
2764 Male, age 80, right hemisphere 16.2
1787 Male, age 76, left hemisphere 13.6
2117 Female, age 91, right hemisphere 6.7
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 12.2
2045 Male, age 76, both hemispheres 11.4
2082 Female, age 91, right hemisphere 10.5
2527 Male, age 74, both hemispheres 10.2
1873 Female, age 85, both hemispheres 9.1
Hippocampus, CA2
nTPM: 7.2
1940 Female, age 85, left hemisphere 9.7
2437 Female, age 94, left hemisphere 9.0
2113 Female, age 91, right hemisphere 8.7
1892 Male, age 76, both hemispheres 7.7
2249 Male, age 74, both hemispheres 4.2
1963 Male, age 80, left hemisphere 3.9
Hippocampus, CA3
nTPM: 12.9
2137 Male, age 80, left hemisphere 20.3
2861 Female, age 67, both hemispheres 16.6
2620 Female, age 94, left hemisphere 13.4
1867 Male, age 76, both hemispheres 10.4
1891 Female, age 85, both hemispheres 9.2
2436 Male, age 74, both hemispheres 7.4
Parahippocampal cortex
nTPM: 15.5
2622 Female, age 67, right hemisphere 21.6
2532 Female, age 72, left hemisphere 19.2
2693 Female, age 94, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.4
1933 Female, age 85, both hemispheres 16.0
2245 Female, age 91, both hemispheres 14.4
2250 Female, age 67, right hemisphere 13.1
2018 Male, age 76, both hemispheres 12.9
1850 Male, age 80, both hemispheres 12.5
1990 Female, age 91, right hemisphere 11.3
Perirhinal gyrus
nTPM: 14.2
1794 Male, age 80, right hemisphere 16.7
1841 Female, age 85, right hemisphere 16.1
1847 Female, age 91, left hemisphere 15.9
2848 Male, age 76, right hemisphere 12.3
2521 Female, age 94, right hemisphere 9.9
Subiculum
nTPM: 10.4
1977 Female, age 85, both hemispheres 14.2
2619 Male, age 74, both hemispheres 14.0
2438 Female, age 94, left hemisphere 10.1
1901 Male, age 80, both hemispheres 10.0
2729 Female, age 91, right hemisphere 7.2
2042 Male, age 76, both hemispheres 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 32.5
Min nTPM: 4.8
Std nTPM: 5.9
Median nTPM: 13.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 32.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 28.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 27.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 26.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 25.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 25.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.6
FF:10153-102I9 76 years, female 74.2
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.4
Sample A Female 15.0
Sample B Female 14.6
Sample C Male 14.3
Sample D Male 11.4
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.5
Min nTPM: 15.3
Sample A Female 16.6
Sample B Female 15.3
Sample C Male 17.5
Sample D Male 15.6
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 13.5
Sample A Female 21.5
Sample B Female 15.7
Sample C Male 19.2
Sample D Male 13.5
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 14.4
Sample C Male 20.6
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 21.2
Min nTPM: 15.3
Sample A Male 15.3
Sample B Male 16.8
Sample C Female 15.8
Sample D Female 21.2
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 6.9
Sample A Male 11.2
Sample B Male 8.9
Sample C Female 6.9
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
70593327 Antisense, RP_050407_03_D11, Mouse strain C57BL/6J (56 days, male) 2.2
74724764 Antisense, RP_060220_04_B07, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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