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ARL6IP1
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  • ARL6IP1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:177.9 nTPM
FANTOM5:212.9 Scaled Tags Per Million
Pig:40.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045307
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 177.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 177.9
Samples: 246

Max nTPM: 419.0
Min nTPM: 110.1
Std nTPM: 37.8
Median nTPM: 173.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 419.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 355.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 338.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 321.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 282.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 278.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 273.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 270.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 260.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 256.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 240.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 235.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 233.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 230.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 221.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 221.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 219.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 218.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 218.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 218.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 215.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 215.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 215.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 214.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 213.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 213.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 212.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 212.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 212.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 211.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 210.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 210.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 209.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 207.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 207.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 206.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 206.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 206.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 203.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 203.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 201.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 200.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 198.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 198.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 197.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 197.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 197.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 196.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 195.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 195.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 195.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 195.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 194.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 194.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 193.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 192.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 192.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 192.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 192.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 191.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 191.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 191.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 191.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 191.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 190.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 190.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 189.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 189.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 189.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 187.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 187.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 186.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 186.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 186.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 185.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 185.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 184.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 183.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 183.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 183.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 183.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 183.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 183.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 182.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 182.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 182.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 181.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 181.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 181.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 180.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 180.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 179.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 179.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 179.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 179.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 179.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 179.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 179.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 179.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 179.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 178.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 178.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 178.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 178.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 177.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 177.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 177.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 176.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 176.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 176.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 176.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 175.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 175.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 174.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 174.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 174.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 174.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 174.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 173.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 173.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 172.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 172.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 172.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 172.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 172.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 171.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 171.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 170.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 170.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 170.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 170.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 169.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 169.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 169.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 169.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 169.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 169.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 168.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 167.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 167.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 167.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 167.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 166.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 166.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 165.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 165.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 165.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 165.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 165.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 165.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 164.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 164.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 164.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 164.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 164.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 163.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 163.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 163.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 162.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 162.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 162.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 162.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 161.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 161.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 161.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 161.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 161.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 161.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 161.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 161.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 160.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 160.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 160.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 160.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 159.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 159.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 159.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 158.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 158.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 158.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 157.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 157.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 157.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 156.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 156.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 153.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 153.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 153.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 153.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 152.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 152.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 151.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 151.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 151.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 150.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 150.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 149.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 149.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 147.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 147.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 145.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 144.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 144.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 144.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 144.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 143.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 141.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 140.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 140.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 138.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 136.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 135.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 134.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 133.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 132.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 131.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 130.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 129.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 129.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 128.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 128.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 127.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 126.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 125.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 122.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 119.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 117.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 111.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 111.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 110.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 212.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 212.9
FF:10164-103B2 76 years, female 212.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 40.7
Pig sample Sample description nTPM
Caudate
nTPM: 40.7
Samples: 4

Max nTPM: 45.3
Min nTPM: 38.3
Sample A Female 38.6
Sample B Female 40.7
Sample C Male 45.3
Sample D Male 38.3

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