HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:85.8 nTPM
HPA:85.8 nTPM
GTEx:90.7 nTPM
FANTOM5:152.3 Scaled Tags Per Million
Pig:53.4 nTPM
Mouse:94.0 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037589Antibody HPA037590Antibody CAB009846
Glial cells LowLowLow
Neuronal cells Not detectedNot detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.8
Sample id Sample description nTPM
Hippocampus
nTPM: 81.4
2529 Female, age 94, left hemisphere 87.5
1898 Male, age 80, left hemisphere 86.5
1911 Female, age 85, right hemisphere 80.9
1855 Male, age 76, left hemisphere 79.1
2621 Female, age 67, right hemisphere 78.1
2148 Female, age 91, left hemisphere 76.4
Dentate gyrus
nTPM: 82.3
2530 Female, age 94, left hemisphere 106.6
2010 Male, age 76, both hemispheres 84.7
2246 Female, age 85, both hemispheres 79.1
2531 Female, age 67, both hemispheres 78.7
2528 Male, age 74, both hemispheres 72.3
1927 Female, age 91, both hemispheres 72.2
Entorhinal gyrus
nTPM: 85.8
2686 Male, age 75, right hemisphere 104.5
2117 Female, age 91, right hemisphere 92.2
1938 Female, age 85, left hemisphere 84.7
2764 Male, age 80, right hemisphere 80.7
1787 Male, age 76, left hemisphere 76.5
2613 Female, age 94, left hemisphere 76.3
Hippocampus, CA1
nTPM: 77.0
2749 Male, age 80, left hemisphere 79.7
1873 Female, age 85, both hemispheres 79.6
2082 Female, age 91, right hemisphere 77.3
2527 Male, age 74, both hemispheres 76.3
2045 Male, age 76, both hemispheres 72.0
Hippocampus, CA2
nTPM: 80.8
1963 Male, age 80, left hemisphere 91.5
2437 Female, age 94, left hemisphere 83.3
1940 Female, age 85, left hemisphere 78.9
1892 Male, age 76, both hemispheres 78.6
2113 Female, age 91, right hemisphere 77.5
2249 Male, age 74, both hemispheres 75.0
Hippocampus, CA3
nTPM: 75.3
1891 Female, age 85, both hemispheres 84.0
1867 Male, age 76, both hemispheres 81.4
2861 Female, age 67, both hemispheres 79.6
2137 Male, age 80, left hemisphere 75.6
2436 Male, age 74, both hemispheres 67.1
2620 Female, age 94, left hemisphere 64.2
Parahippocampal cortex
nTPM: 80.8
2692 Male, age 74, both hemispheres 86.7
2532 Female, age 72, left hemisphere 85.1
1933 Female, age 85, both hemispheres 83.6
2622 Female, age 67, right hemisphere 83.6
2018 Male, age 76, both hemispheres 82.5
1850 Male, age 80, both hemispheres 80.9
2245 Female, age 91, both hemispheres 80.2
1990 Female, age 91, right hemisphere 79.8
2250 Female, age 67, right hemisphere 72.9
2693 Female, age 94, both hemispheres 72.6
Perirhinal gyrus
nTPM: 76.0
1841 Female, age 85, right hemisphere 86.3
2848 Male, age 76, right hemisphere 79.6
1794 Male, age 80, right hemisphere 75.1
1847 Female, age 91, left hemisphere 71.3
2521 Female, age 94, right hemisphere 67.9
Subiculum
nTPM: 85.1
2438 Female, age 94, left hemisphere 94.2
2042 Male, age 76, both hemispheres 90.8
1901 Male, age 80, both hemispheres 89.8
1977 Female, age 85, both hemispheres 84.6
2729 Female, age 91, right hemisphere 77.5
2619 Male, age 74, both hemispheres 73.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.7
Samples: 197

Max nTPM: 323.5
Min nTPM: 31.3
Std nTPM: 48.6
Median nTPM: 80.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 323.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 289.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 282.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 260.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 242.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 222.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 201.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 198.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 192.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 189.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 174.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.3
FF:10153-102I9 76 years, female 187.5
FF:10169-103B7 60 years, female 117.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.7
Samples: 4

Max nTPM: 59.3
Min nTPM: 39.0
Sample A Female 59.3
Sample B Female 43.5
Sample C Male 53.1
Sample D Male 39.0
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 53.5
Min nTPM: 43.5
Sample A Female 44.4
Sample B Female 53.5
Sample C Male 44.9
Sample D Male 43.5
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 69.9
Min nTPM: 44.6
Sample A Female 69.9
Sample B Female 52.3
Sample C Male 46.7
Sample D Male 44.6
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 45.1
Min nTPM: 36.3
Sample A Female 44.3
Sample B Female 41.8
Sample C Male 36.3
Sample D Male 45.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 103.4
Min nTPM: 80.9
Sample A Male 103.4
Sample B Male 97.5
Sample C Female 94.4
Sample D Female 80.9
Hippocampal formation
nTPM: 88.6
Samples: 4

Max nTPM: 94.3
Min nTPM: 86.1
Sample A Male 87.8
Sample B Male 86.1
Sample C Female 94.3
Sample D Female 86.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
2354 Antisense, RP_Baylor_102875, Mouse strain C57BL/6J (56 days, male) 1.2
2353 Antisense, RP_Baylor_102875, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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