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ATP6V0E2
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  • ATP6V0E2
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:270.4 nTPM
HPA:270.4 nTPM
GTEx:327.0 nTPM
FANTOM5:251.6 Scaled Tags Per Million
Mouse:471.7 nTPM
Allen mouse:24.6 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 270.4
Sample id Sample description nTPM
Amygdala
nTPM: 254.9
2814 Male, age 76, right hemisphere 292.8
2695 Female, age 67, right hemisphere 286.2
1987 Female, age 91, left hemisphere 245.3
2517 Female, age 94, left hemisphere 228.0
2514 Male, age 75, right hemisphere 222.4
Basal amygdala
nTPM: 260.4
2243 Female, age 91, right hemisphere 311.0
2609 Male, age 75, right hemisphere 266.7
2827 Female, age 67, right hemisphere 253.0
2685 Female, age 94, left hemisphere 252.8
1955 Male, age 76, both hemispheres 248.8
2110 Male, age 80, left hemisphere 230.4
Central amygdala
nTPM: 270.4
1905 Male, age 76, both hemispheres 296.0
2826 Female, age 94, left hemisphere 291.5
2239 Male, age 80, left hemisphere 267.1
2515 Male, age 75, right hemisphere 263.3
2701 Female, age 91, right hemisphere 234.2
Corticomedial amygdala
nTPM: 241.0
2242 Female, age 91, right hemisphere 263.6
2428 Male, age 75, right hemisphere 246.7
2829 Male, age 80, left hemisphere 246.2
2240 Male, age 76, both hemispheres 239.3
2535 Female, age 67, right hemisphere 232.5
2429 Female, age 94, left hemisphere 217.5
Lateral amygdala
nTPM: 266.9
2534 Female, age 94, left hemisphere 289.0
1883 Male, age 76, both hemispheres 288.5
2830 Female, age 67, right hemisphere 282.0
2516 Male, age 75, right hemisphere 268.9
2255 Female, age 91, right hemisphere 241.8
2256 Male, age 80, left hemisphere 231.2
Stria terminalis, bed nucleus
nTPM: 240.0
1974 Female, age 91, both hemispheres 255.4
2486 Female, age 94, both hemispheres 238.8
2201 Male, age 74, unknown 225.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 327.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 327.0
Samples: 152

Max nTPM: 749.3
Min nTPM: 11.8
Std nTPM: 110.3
Median nTPM: 322.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 749.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 657.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 646.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 629.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 536.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 533.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 511.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 510.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 491.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 485.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 479.7
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 473.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 460.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 455.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 455.2
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 453.9
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 441.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 439.6
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 436.8
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 436.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 431.6
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 430.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 427.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 426.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 426.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 425.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 424.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 424.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 417.6
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 417.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 416.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 413.5
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 413.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 411.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 407.9
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 406.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 405.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 403.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 398.1
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 397.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 396.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 391.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 391.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 391.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 383.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 382.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 382.7
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 382.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 378.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 367.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 364.0
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 363.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 362.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 352.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 350.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 349.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 347.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 343.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 341.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 340.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 338.9
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 338.2
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 336.1
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 335.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 335.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 334.3
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 334.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 334.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 333.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 327.3
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 326.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 326.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 325.7
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 322.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 322.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 322.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 322.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 316.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 314.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 312.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 310.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 310.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 309.9
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 309.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 306.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 305.0
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 301.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 299.5
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 298.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 298.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 298.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 296.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 294.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 292.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 290.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 290.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 290.0
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 289.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 287.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 283.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 282.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 280.8
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 279.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 274.4
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 269.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 267.9
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 267.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 267.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 261.3
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 259.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 259.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 259.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 253.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 250.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 246.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 245.0
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 243.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 242.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 241.8
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 239.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 234.3
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 234.1
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 232.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 230.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 226.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 224.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 222.1
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 220.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 219.7
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 218.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 214.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 213.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 210.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 209.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 205.3
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 204.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 203.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 199.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 189.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 188.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 188.3
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 178.3
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 177.7
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 176.3
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 165.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 161.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 154.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 135.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 129.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 122.2
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 114.5
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 11.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 251.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 251.6
FF:10151-102I7 76 years, female 251.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 471.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 471.7
Samples: 4

Max nTPM: 487.1
Min nTPM: 462.9
Sample A Male 487.1
Sample B Male 472.6
Sample C Female 464.3
Sample D Female 462.9

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 24.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 24.6
69059973 Antisense, RP_050317_04_H06, Mouse strain C57BL/6J (56 days, male) 24.6

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