HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:328.6 nTPM
HPA:328.6 nTPM
GTEx:403.7 nTPM
FANTOM5:464.6 Scaled Tags Per Million
Mouse:496.2 nTPM
Allen mouse:22.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 328.6
Sample id Sample description nTPM
Hippocampus
nTPM: 310.7
1898 Male, age 80, left hemisphere 387.4
1855 Male, age 76, left hemisphere 337.1
2621 Female, age 67, right hemisphere 326.9
2148 Female, age 91, left hemisphere 323.7
1911 Female, age 85, right hemisphere 254.9
2529 Female, age 94, left hemisphere 234.4
Dentate gyrus
nTPM: 321.3
2530 Female, age 94, left hemisphere 395.4
1927 Female, age 91, both hemispheres 359.0
2010 Male, age 76, both hemispheres 336.0
2528 Male, age 74, both hemispheres 283.5
2246 Female, age 85, both hemispheres 281.2
2531 Female, age 67, both hemispheres 272.6
Entorhinal gyrus
nTPM: 264.0
2613 Female, age 94, left hemisphere 336.0
2764 Male, age 80, right hemisphere 267.0
1938 Female, age 85, left hemisphere 254.7
1787 Male, age 76, left hemisphere 250.8
2686 Male, age 75, right hemisphere 248.0
2117 Female, age 91, right hemisphere 227.8
Hippocampus, CA1
nTPM: 328.6
2749 Male, age 80, left hemisphere 540.7
1873 Female, age 85, both hemispheres 357.5
2527 Male, age 74, both hemispheres 274.1
2045 Male, age 76, both hemispheres 248.4
2082 Female, age 91, right hemisphere 222.2
Hippocampus, CA2
nTPM: 310.5
1963 Male, age 80, left hemisphere 499.7
1892 Male, age 76, both hemispheres 389.5
2437 Female, age 94, left hemisphere 304.7
2249 Male, age 74, both hemispheres 244.7
2113 Female, age 91, right hemisphere 217.9
1940 Female, age 85, left hemisphere 206.4
Hippocampus, CA3
nTPM: 298.5
2861 Female, age 67, both hemispheres 375.4
2137 Male, age 80, left hemisphere 350.3
1867 Male, age 76, both hemispheres 297.6
2620 Female, age 94, left hemisphere 288.4
1891 Female, age 85, both hemispheres 240.0
2436 Male, age 74, both hemispheres 239.0
Parahippocampal cortex
nTPM: 240.8
2692 Male, age 74, both hemispheres 275.3
2622 Female, age 67, right hemisphere 262.2
2245 Female, age 91, both hemispheres 253.1
1990 Female, age 91, right hemisphere 249.1
1850 Male, age 80, both hemispheres 244.4
1933 Female, age 85, both hemispheres 236.8
2693 Female, age 94, both hemispheres 230.1
2532 Female, age 72, left hemisphere 225.8
2250 Female, age 67, right hemisphere 219.1
2018 Male, age 76, both hemispheres 212.5
Perirhinal gyrus
nTPM: 247.2
1847 Female, age 91, left hemisphere 289.1
1794 Male, age 80, right hemisphere 257.9
2521 Female, age 94, right hemisphere 234.8
1841 Female, age 85, right hemisphere 228.5
2848 Male, age 76, right hemisphere 226.0
Subiculum
nTPM: 250.9
1901 Male, age 80, both hemispheres 279.1
2619 Male, age 74, both hemispheres 253.5
1977 Female, age 85, both hemispheres 250.6
2729 Female, age 91, right hemisphere 249.5
2438 Female, age 94, left hemisphere 246.6
2042 Male, age 76, both hemispheres 226.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 403.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 403.7
Samples: 197

Max nTPM: 1145.8
Min nTPM: 51.2
Std nTPM: 198.5
Median nTPM: 364.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1145.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 1027.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1001.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 974.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 948.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 927.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 926.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 912.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 861.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 858.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 813.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 464.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 464.6
FF:10169-103B7 60 years, female 701.0
FF:10153-102I9 76 years, female 228.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 496.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 470.0
Samples: 4

Max nTPM: 559.4
Min nTPM: 417.9
Sample A Male 417.9
Sample B Male 443.1
Sample C Female 459.6
Sample D Female 559.4
Hippocampal formation
nTPM: 496.2
Samples: 4

Max nTPM: 531.2
Min nTPM: 465.4
Sample A Male 510.7
Sample B Male 477.5
Sample C Female 531.2
Sample D Female 465.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
69059973 Antisense, RP_050317_04_H06, Mouse strain C57BL/6J (56 days, male) 22.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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