COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.8 nTPM
HPA:34.3 nTPM
GTEx:44.8 nTPM
FANTOM5:55.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA042250
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 34.3
overview
Male, age 54 		Colon sample 67
nTPM: 42.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 32.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 32.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 29.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 38.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 27.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 30.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 31.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 47.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 35.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 31.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 44.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 44.8
Samples: 373

Max nTPM: 127.8
Min nTPM: 15.2
Std nTPM: 8.9
Median nTPM: 44.5
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 127.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 71.3
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 65.5
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 64.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 64.1
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 64.0
GTEX-1OFPY-1226-SM-E76OM 60-69 years, male 63.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 62.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 62.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 61.4
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 61.3
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Colon - Transverse
Average nTPM: 39.4
Samples: 406

Max nTPM: 63.4
Min nTPM: 18.5
Std nTPM: 6.2
Median nTPM: 38.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 63.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 59.8
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 57.3
GTEX-14E1K-1826-SM-793DT 50-59 years, male 56.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 55.5
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 55.1
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 54.9
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 54.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 53.5
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 53.4
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 53.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 55.5
FF:10014-101C5 62,83,84 years, mixed 55.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.