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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 82.2
Min nTPM: 11.4
Std nTPM: 11.6
Median nTPM:
413_1
59 years, female
82.2
501_1
88 years, male
75.5
506_1
65 years, male
62.2
466_1
57 years, female
53.9
217_1
76 years, male
53.2
288_1
66 years, female
52.8
177_1
74 years, male
52.5
264_1
73 years, female
52.5
254_1
77 years, female
52.0
518_1
75 years, female
51.3
295_1
61 years, female
50.9
265_1
87 years, male
49.7
315_1
62 years, female
49.7
324_1
76 years, male
49.6
376_1
75 years, female
48.8
314_1
67 years, male
48.5
18_1
88 years, male
48.3
425_1
59 years, female
47.7
145_1
84 years, male
47.2
142_1
61 years, female
46.8
349_1
83 years, male
46.8
149_1
88 years, male
46.5
32_1
67 years, male
46.4
317_1
60 years, male
46.2
335_1
73 years, female
45.9
396_1
62 years, male
45.7
517_1
88 years, male
45.7
81_1
67 years, male
45.6
119_1
70 years, female
45.6
115_1
83 years, male
45.3
353_1
82 years, female
45.3
405_1
91 years, male
44.6
406_1
79 years, male
44.5
452_1
88 years, female
44.2
109_1
81 years, female
44.1
318_1
68 years, male
43.9
404_1
82 years, female
43.6
99_1
64 years, male
43.0
162_1
79 years, female
42.4
189_1
76 years, male
42.3
320_1
89 years, female
42.0
414_1
84 years, female
42.0
229_1
69 years, female
41.0
526_1
61 years, male
40.5
313_1
79 years, female
40.3
120_1
70 years, female
40.0
348_1
84 years, male
39.8
163_1
78 years, male
39.5
351_1
91 years, male
39.4
291_1
76 years, male
39.2
17_1
71 years, male
39.1
266_1
85 years, male
39.0
415_1
77 years, female
39.0
117_1
61 years, male
38.2
9_1
66 years, female
38.1
491_1
89 years, female
37.4
89_1
63 years, male
37.3
386_1
76 years, male
37.3
499_1
55 years, female
37.0
172_1
72 years, female
36.7
377_1
82 years, female
36.3
292_1
71 years, male
36.1
286_1
68 years, female
35.9
251_1
78 years, male
35.8
321_1
62 years, female
35.4
6_1
73 years, female
35.2
43_1
64 years, female
35.1
4_1
88 years, female
34.5
173_1
67 years, male
34.5
468_1
89 years, male
34.3
243_1
75 years, male
33.0
322_1
76 years, male
33.0
480_1
63 years, male
33.0
352_1
62 years, male
32.6
503_1
68 years, male
32.5
126_1
63 years, male
31.0
356_1
87 years, female
30.8
2_1
77 years, female
30.6
347_1
72 years, male
30.2
137_1
83 years, male
30.0
153_1
70 years, female
30.0
42_1
85 years, male
29.9
293_1
68 years, female
29.9
354_1
81 years, female
29.7
246_1
77 years, male
29.4
355_1
70 years, female
29.4
316_1
62 years, male
28.6
350_1
84 years, female
28.6
35_1
74 years, female
28.3
139_1
64 years, female
28.0
311_1
78 years, male
26.8
447_1
81 years, male
26.3
319_1
81 years, male
25.7
394_1
75 years, female
24.9
41_1
94 years, female
24.1
375_1
74 years, female
21.2
490_1
67 years, female
20.6
307_1
66 years, female
20.3
389_1
86 years, female
20.3
379_1
60 years, male
18.4
237_1
82 years, male
17.2
384_1
83 years, male
15.2
218_1
71 years, female
12.5
495_1
57 years, female
11.5
308_1
70 years, female
11.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
