COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:61.5 nTPM
HPA:21.1 nTPM
GTEx:61.5 nTPM
FANTOM5:103.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 21.1
overview
Male, age 54 		Colon sample 67
nTPM: 49.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 34.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 45.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 59.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 26.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 4.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 4.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 13.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 59.0
Samples: 373

Max nTPM: 164.3
Min nTPM: 30.5
Std nTPM: 15.0
Median nTPM: 57.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 164.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 119.3
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 102.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 98.9
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 96.4
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 95.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 95.2
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 94.7
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 92.5
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 92.4
GTEX-WRHK-1126-SM-4MVOJ 20-29 years, female 91.4
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Colon - Transverse
Average nTPM: 61.5
Samples: 406

Max nTPM: 154.5
Min nTPM: 31.1
Std nTPM: 15.6
Median nTPM: 59.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 154.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 140.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 114.6
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 107.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 107.5
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 104.2
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 102.9
GTEX-1I4MK-1126-SM-B2LWS 50-59 years, female 101.9
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 100.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 97.3
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 94.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 103.7
FF:10014-101C5 62,83,84 years, mixed 103.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.