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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:73.2 nTPM
FANTOM5:177.1 Scaled Tags Per Million
Pig:28.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019149Antibody CAB004464
Glial cells HighNot detected
Neuronal cells HighNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 73.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.2
Samples: 246

Max nTPM: 351.8
Min nTPM: 13.4
Std nTPM: 58.0
Median nTPM: 56.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 351.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 345.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 336.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 305.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 283.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 266.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 243.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 230.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 214.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 211.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 209.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 201.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 198.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 194.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 188.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 164.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 163.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 159.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 158.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 146.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 145.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 144.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 143.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 139.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 135.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 134.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 134.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 126.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 125.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 119.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 118.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 115.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 114.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 110.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 110.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 108.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 107.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 106.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 104.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 103.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 102.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 99.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 98.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 97.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 95.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 95.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 94.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 94.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 94.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 93.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 93.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 92.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 91.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 91.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 91.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 90.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 89.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 88.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 88.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 88.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 86.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 85.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 84.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 82.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 82.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 82.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 80.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 79.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 77.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 77.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 76.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 76.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 71.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 70.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 70.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 68.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 67.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 66.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 66.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 66.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 65.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 63.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 62.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 61.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 61.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 60.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 59.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 59.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 59.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 58.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 57.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 57.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 56.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 55.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 55.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 54.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 54.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 54.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 52.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 52.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 52.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 51.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 51.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 50.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 49.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 48.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 48.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 47.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 47.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 47.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 46.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 46.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 46.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 46.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 45.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 43.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 42.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 42.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 42.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 42.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 42.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 42.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 41.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 40.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 40.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 40.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 40.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 39.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 39.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 38.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 38.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 38.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 37.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 36.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 36.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 36.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 36.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 36.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 35.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 35.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 34.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 34.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 34.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 34.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 33.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 33.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 32.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 31.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 30.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 30.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 30.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 29.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 28.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 28.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 28.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 28.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 28.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 28.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 27.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 27.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 27.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 27.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 27.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 26.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 24.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 24.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 23.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 23.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 22.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 22.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 21.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 21.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 21.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 21.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 20.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 19.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 18.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 18.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 17.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 15.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 14.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 177.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 177.1
FF:10164-103B2 76 years, female 177.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 28.8
Pig sample Sample description nTPM
Caudate
nTPM: 28.8
Samples: 4

Max nTPM: 35.4
Min nTPM: 23.9
Sample A Female 25.6
Sample B Female 23.9
Sample C Male 30.3
Sample D Male 35.4

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