HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.1 nTPM
HPA:18.1 nTPM
GTEx:14.6 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:12.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039893
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.1
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
2621 Female, age 67, right hemisphere 18.3
2148 Female, age 91, left hemisphere 18.0
1898 Male, age 80, left hemisphere 17.3
1855 Male, age 76, left hemisphere 17.0
2529 Female, age 94, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.7
Dentate gyrus
nTPM: 16.7
2531 Female, age 67, both hemispheres 17.7
1927 Female, age 91, both hemispheres 17.1
2246 Female, age 85, both hemispheres 16.7
2010 Male, age 76, both hemispheres 16.4
2530 Female, age 94, left hemisphere 16.2
2528 Male, age 74, both hemispheres 16.1
Entorhinal gyrus
nTPM: 18.1
1787 Male, age 76, left hemisphere 19.9
2613 Female, age 94, left hemisphere 18.9
2686 Male, age 75, right hemisphere 18.9
1938 Female, age 85, left hemisphere 17.5
2764 Male, age 80, right hemisphere 17.3
2117 Female, age 91, right hemisphere 16.3
Hippocampus, CA1
nTPM: 17.1
2749 Male, age 80, left hemisphere 18.9
2045 Male, age 76, both hemispheres 17.6
2082 Female, age 91, right hemisphere 16.8
1873 Female, age 85, both hemispheres 16.1
2527 Male, age 74, both hemispheres 16.0
Hippocampus, CA2
nTPM: 16.9
1892 Male, age 76, both hemispheres 18.2
2437 Female, age 94, left hemisphere 17.8
1940 Female, age 85, left hemisphere 17.6
1963 Male, age 80, left hemisphere 16.8
2113 Female, age 91, right hemisphere 16.7
2249 Male, age 74, both hemispheres 14.5
Hippocampus, CA3
nTPM: 17.1
2861 Female, age 67, both hemispheres 18.9
2620 Female, age 94, left hemisphere 18.8
1891 Female, age 85, both hemispheres 17.5
2137 Male, age 80, left hemisphere 16.5
1867 Male, age 76, both hemispheres 16.2
2436 Male, age 74, both hemispheres 14.7
Parahippocampal cortex
nTPM: 17.4
2692 Male, age 74, both hemispheres 18.6
1933 Female, age 85, both hemispheres 18.3
1850 Male, age 80, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.8
2693 Female, age 94, both hemispheres 17.8
2622 Female, age 67, right hemisphere 17.5
2250 Female, age 67, right hemisphere 17.1
1990 Female, age 91, right hemisphere 17.0
2018 Male, age 76, both hemispheres 16.4
2245 Female, age 91, both hemispheres 16.1
Perirhinal gyrus
nTPM: 18.0
2848 Male, age 76, right hemisphere 18.6
1794 Male, age 80, right hemisphere 18.2
1847 Female, age 91, left hemisphere 17.8
2521 Female, age 94, right hemisphere 17.7
1841 Female, age 85, right hemisphere 17.6
Subiculum
nTPM: 16.8
2438 Female, age 94, left hemisphere 17.5
1977 Female, age 85, both hemispheres 17.3
1901 Male, age 80, both hemispheres 16.6
2619 Male, age 74, both hemispheres 16.6
2729 Female, age 91, right hemisphere 16.6
2042 Male, age 76, both hemispheres 16.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 26.6
Min nTPM: 7.1
Std nTPM: 3.3
Median nTPM: 14.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 23.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 21.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 20.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 20.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 20.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 20.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 16.9
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.4
Sample A Female 11.4
Sample B Female 9.6
Sample C Male 9.5
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 9.0
Sample A Female 9.7
Sample B Female 9.1
Sample C Male 9.2
Sample D Male 9.0
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.7
Sample A Female 11.9
Sample B Female 7.9
Sample C Male 8.4
Sample D Male 7.7
Ventral hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.6
Sample A Female 8.6
Sample B Female 7.6
Sample C Male 9.8
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 14.3
Min nTPM: 12.0
Sample A Male 14.3
Sample B Male 12.4
Sample C Female 12.0
Sample D Female 12.6
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.9
Sample A Male 12.7
Sample B Male 13.5
Sample C Female 11.9
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
686216 Antisense, RP_040916_01_C02, Mouse strain C57BL/6J (56 days, male) 0.3

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