HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.0 nTPM
HPA:15.0 nTPM
GTEx:9.2 nTPM
FANTOM5:48.9 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:33.0 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052828
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.0
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
1855 Male, age 76, left hemisphere 16.8
2148 Female, age 91, left hemisphere 16.6
2529 Female, age 94, left hemisphere 15.3
2621 Female, age 67, right hemisphere 14.8
1911 Female, age 85, right hemisphere 13.5
1898 Male, age 80, left hemisphere 13.2
Dentate gyrus
nTPM: 15.0
2530 Female, age 94, left hemisphere 17.3
2246 Female, age 85, both hemispheres 16.2
1927 Female, age 91, both hemispheres 15.4
2531 Female, age 67, both hemispheres 15.0
2010 Male, age 76, both hemispheres 13.4
2528 Male, age 74, both hemispheres 12.7
Entorhinal gyrus
nTPM: 11.0
2117 Female, age 91, right hemisphere 13.7
2686 Male, age 75, right hemisphere 12.4
2613 Female, age 94, left hemisphere 11.5
1787 Male, age 76, left hemisphere 10.3
2764 Male, age 80, right hemisphere 9.2
1938 Female, age 85, left hemisphere 8.8
Hippocampus, CA1
nTPM: 13.5
2045 Male, age 76, both hemispheres 16.5
1873 Female, age 85, both hemispheres 15.3
2082 Female, age 91, right hemisphere 14.1
2527 Male, age 74, both hemispheres 12.9
2749 Male, age 80, left hemisphere 8.9
Hippocampus, CA2
nTPM: 14.4
1963 Male, age 80, left hemisphere 16.9
2437 Female, age 94, left hemisphere 16.9
1940 Female, age 85, left hemisphere 15.7
2113 Female, age 91, right hemisphere 12.8
2249 Male, age 74, both hemispheres 12.8
1892 Male, age 76, both hemispheres 11.2
Hippocampus, CA3
nTPM: 14.2
2436 Male, age 74, both hemispheres 20.2
2861 Female, age 67, both hemispheres 19.2
2620 Female, age 94, left hemisphere 12.4
1867 Male, age 76, both hemispheres 11.5
2137 Male, age 80, left hemisphere 11.3
1891 Female, age 85, both hemispheres 10.7
Parahippocampal cortex
nTPM: 10.8
2018 Male, age 76, both hemispheres 15.1
2622 Female, age 67, right hemisphere 14.3
2250 Female, age 67, right hemisphere 14.0
2245 Female, age 91, both hemispheres 11.4
1933 Female, age 85, both hemispheres 11.2
2692 Male, age 74, both hemispheres 11.1
2532 Female, age 72, left hemisphere 9.2
2693 Female, age 94, both hemispheres 8.8
1990 Female, age 91, right hemisphere 7.2
1850 Male, age 80, both hemispheres 5.9
Perirhinal gyrus
nTPM: 7.9
1847 Female, age 91, left hemisphere 9.1
2521 Female, age 94, right hemisphere 9.0
1794 Male, age 80, right hemisphere 7.7
1841 Female, age 85, right hemisphere 7.1
2848 Male, age 76, right hemisphere 6.7
Subiculum
nTPM: 12.8
2729 Female, age 91, right hemisphere 17.3
2619 Male, age 74, both hemispheres 14.3
2042 Male, age 76, both hemispheres 13.8
2438 Female, age 94, left hemisphere 11.1
1901 Male, age 80, both hemispheres 10.3
1977 Female, age 85, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 21.4
Min nTPM: 3.6
Std nTPM: 3.0
Median nTPM: 8.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 17.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 17.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 15.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 14.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 14.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.9
FF:10153-102I9 76 years, female 54.0
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.8
Sample A Female 9.3
Sample B Female 9.0
Sample C Male 6.8
Sample D Male 9.6
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.0
Sample A Female 7.1
Sample B Female 6.0
Sample C Male 8.4
Sample D Male 6.3
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.8
Sample A Female 10.0
Sample B Female 6.8
Sample C Male 8.9
Sample D Male 7.1
Ventral hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 7.8
Sample A Female 15.7
Sample B Female 8.0
Sample C Male 16.2
Sample D Male 7.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.1
Sample A Male 18.1
Sample B Male 16.1
Sample C Female 23.2
Sample D Female 23.7
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 42.1
Min nTPM: 26.8
Sample A Male 26.8
Sample B Male 33.0
Sample C Female 42.1
Sample D Female 30.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
71021154 Antisense, RP_050526_02_H07, Mouse strain C57BL/6J (56 days, male) 7.2
73931625 Antisense, RP_051214_04_A05, Mouse strain C57BL/6J (56 days, male) 4.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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