HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.6 nTPM
HPA:36.6 nTPM
GTEx:39.3 nTPM
FANTOM5:10.1 Scaled Tags Per Million
Pig:3.3 nTPM
Mouse:47.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047238
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 35.6
1898 Male, age 80, left hemisphere 37.7
2529 Female, age 94, left hemisphere 36.3
2621 Female, age 67, right hemisphere 35.7
1855 Male, age 76, left hemisphere 34.8
1911 Female, age 85, right hemisphere 34.5
2148 Female, age 91, left hemisphere 34.4
Dentate gyrus
nTPM: 35.6
2010 Male, age 76, both hemispheres 37.0
2530 Female, age 94, left hemisphere 36.7
1927 Female, age 91, both hemispheres 36.6
2528 Male, age 74, both hemispheres 35.7
2246 Female, age 85, both hemispheres 34.5
2531 Female, age 67, both hemispheres 33.4
Entorhinal gyrus
nTPM: 34.2
2764 Male, age 80, right hemisphere 35.8
1787 Male, age 76, left hemisphere 34.7
2117 Female, age 91, right hemisphere 34.5
1938 Female, age 85, left hemisphere 34.3
2613 Female, age 94, left hemisphere 33.2
2686 Male, age 75, right hemisphere 32.7
Hippocampus, CA1
nTPM: 36.6
2749 Male, age 80, left hemisphere 41.5
1873 Female, age 85, both hemispheres 36.0
2527 Male, age 74, both hemispheres 35.9
2045 Male, age 76, both hemispheres 35.3
2082 Female, age 91, right hemisphere 34.4
Hippocampus, CA2
nTPM: 36.5
2249 Male, age 74, both hemispheres 39.4
1892 Male, age 76, both hemispheres 39.1
1963 Male, age 80, left hemisphere 37.3
1940 Female, age 85, left hemisphere 35.0
2113 Female, age 91, right hemisphere 34.1
2437 Female, age 94, left hemisphere 34.0
Hippocampus, CA3
nTPM: 36.2
2137 Male, age 80, left hemisphere 38.8
2436 Male, age 74, both hemispheres 37.7
1891 Female, age 85, both hemispheres 37.2
1867 Male, age 76, both hemispheres 37.1
2620 Female, age 94, left hemisphere 35.3
2861 Female, age 67, both hemispheres 31.2
Parahippocampal cortex
nTPM: 34.6
1933 Female, age 85, both hemispheres 36.4
1850 Male, age 80, both hemispheres 36.1
1990 Female, age 91, right hemisphere 35.6
2245 Female, age 91, both hemispheres 35.3
2250 Female, age 67, right hemisphere 35.0
2018 Male, age 76, both hemispheres 34.7
2692 Male, age 74, both hemispheres 33.8
2532 Female, age 72, left hemisphere 33.6
2693 Female, age 94, both hemispheres 32.9
2622 Female, age 67, right hemisphere 32.6
Perirhinal gyrus
nTPM: 36.2
1841 Female, age 85, right hemisphere 37.7
1847 Female, age 91, left hemisphere 37.6
1794 Male, age 80, right hemisphere 37.2
2848 Male, age 76, right hemisphere 34.2
2521 Female, age 94, right hemisphere 34.1
Subiculum
nTPM: 35.3
1977 Female, age 85, both hemispheres 36.6
2619 Male, age 74, both hemispheres 36.1
2042 Male, age 76, both hemispheres 35.6
1901 Male, age 80, both hemispheres 35.5
2438 Female, age 94, left hemisphere 35.1
2729 Female, age 91, right hemisphere 33.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 87.0
Min nTPM: 24.2
Std nTPM: 9.2
Median nTPM: 37.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 87.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 68.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 61.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 61.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 61.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 59.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 58.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 56.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.1
FF:10169-103B7 60 years, female 10.4
FF:10153-102I9 76 years, female 9.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.6
Sample A Female 4.4
Sample B Female 3.1
Sample C Male 3.1
Sample D Male 2.6
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.4
Sample A Female 3.0
Sample B Female 3.3
Sample C Male 2.6
Sample D Male 2.4
Subiculum
nTPM: 2.7
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.3
Sample A Female 3.4
Sample B Female 2.4
Sample C Male 2.3
Sample D Male 2.5
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.2
Sample A Female 3.4
Sample B Female 2.2
Sample C Male 3.4
Sample D Male 3.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 51.2
Min nTPM: 36.3
Sample A Male 39.0
Sample B Male 51.2
Sample C Female 39.7
Sample D Female 36.3
Hippocampal formation
nTPM: 47.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 45.3
Sample A Male 46.9
Sample B Male 45.3
Sample C Female 47.0
Sample D Female 49.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68269532 Antisense, RP_041129_01_G06, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.