HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:134.8 nTPM
HPA:134.8 nTPM
GTEx:159.1 nTPM
FANTOM5:315.9 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:210.8 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036487
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 134.8
Sample id Sample description nTPM
Hippocampus
nTPM: 134.6
1898 Male, age 80, left hemisphere 140.7
2529 Female, age 94, left hemisphere 136.3
2621 Female, age 67, right hemisphere 136.2
1855 Male, age 76, left hemisphere 134.7
2148 Female, age 91, left hemisphere 130.3
1911 Female, age 85, right hemisphere 129.4
Dentate gyrus
nTPM: 133.0
2010 Male, age 76, both hemispheres 140.5
2530 Female, age 94, left hemisphere 136.5
2246 Female, age 85, both hemispheres 136.4
1927 Female, age 91, both hemispheres 133.1
2531 Female, age 67, both hemispheres 127.0
2528 Male, age 74, both hemispheres 124.6
Entorhinal gyrus
nTPM: 130.3
1938 Female, age 85, left hemisphere 137.2
2764 Male, age 80, right hemisphere 132.9
1787 Male, age 76, left hemisphere 131.2
2117 Female, age 91, right hemisphere 129.8
2686 Male, age 75, right hemisphere 126.8
2613 Female, age 94, left hemisphere 124.0
Hippocampus, CA1
nTPM: 134.8
2749 Male, age 80, left hemisphere 145.4
2527 Male, age 74, both hemispheres 135.7
1873 Female, age 85, both hemispheres 133.6
2045 Male, age 76, both hemispheres 131.2
2082 Female, age 91, right hemisphere 128.2
Hippocampus, CA2
nTPM: 131.9
1892 Male, age 76, both hemispheres 138.1
2249 Male, age 74, both hemispheres 135.5
1963 Male, age 80, left hemisphere 132.6
1940 Female, age 85, left hemisphere 130.0
2437 Female, age 94, left hemisphere 127.5
2113 Female, age 91, right hemisphere 127.4
Hippocampus, CA3
nTPM: 130.8
2137 Male, age 80, left hemisphere 136.8
2436 Male, age 74, both hemispheres 133.8
1867 Male, age 76, both hemispheres 132.4
1891 Female, age 85, both hemispheres 130.6
2620 Female, age 94, left hemisphere 128.1
2861 Female, age 67, both hemispheres 123.0
Parahippocampal cortex
nTPM: 132.6
1850 Male, age 80, both hemispheres 136.2
2532 Female, age 72, left hemisphere 136.2
2245 Female, age 91, both hemispheres 136.1
1933 Female, age 85, both hemispheres 134.0
2018 Male, age 76, both hemispheres 133.9
2250 Female, age 67, right hemisphere 133.3
1990 Female, age 91, right hemisphere 131.6
2692 Male, age 74, both hemispheres 129.6
2693 Female, age 94, both hemispheres 128.5
2622 Female, age 67, right hemisphere 127.1
Perirhinal gyrus
nTPM: 133.7
1794 Male, age 80, right hemisphere 136.9
2521 Female, age 94, right hemisphere 134.1
1841 Female, age 85, right hemisphere 133.8
1847 Female, age 91, left hemisphere 132.7
2848 Male, age 76, right hemisphere 130.9
Subiculum
nTPM: 131.9
2438 Female, age 94, left hemisphere 139.6
1901 Male, age 80, both hemispheres 134.0
1977 Female, age 85, both hemispheres 131.4
2042 Male, age 76, both hemispheres 131.2
2619 Male, age 74, both hemispheres 130.9
2729 Female, age 91, right hemisphere 124.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 159.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 159.1
Samples: 197

Max nTPM: 429.1
Min nTPM: 101.9
Std nTPM: 37.3
Median nTPM: 152.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 429.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 279.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 253.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 241.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 241.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 235.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 234.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 226.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 222.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 220.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 220.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 315.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 315.9
FF:10169-103B7 60 years, female 464.5
FF:10153-102I9 76 years, female 167.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 25.7
Min nTPM: 16.4
Sample A Female 25.7
Sample B Female 19.9
Sample C Male 20.5
Sample D Male 16.4
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 18.4
Sample A Female 22.7
Sample B Female 20.2
Sample C Male 18.4
Sample D Male 19.6
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.6
Sample A Female 22.9
Sample B Female 18.6
Sample C Male 19.6
Sample D Male 19.4
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 23.4
Min nTPM: 17.1
Sample A Female 23.4
Sample B Female 18.0
Sample C Male 18.7
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 210.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 196.8
Samples: 4

Max nTPM: 218.6
Min nTPM: 182.0
Sample A Male 182.0
Sample B Male 201.7
Sample C Female 218.6
Sample D Female 185.0
Hippocampal formation
nTPM: 210.8
Samples: 4

Max nTPM: 250.3
Min nTPM: 190.6
Sample A Male 250.3
Sample B Male 190.6
Sample C Female 197.5
Sample D Female 204.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68861975 Antisense, RP_050301_01_C05, Mouse strain C57BL/6J (56 days, male) 4.7

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